Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SNORA12.2-201ENST00000391040 156 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RPS29P13-201ENST00000402041 169 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 MIR1298-201ENST00000408783 112 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RN7SKP216-201ENST00000411050 312 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AC091390.3-201ENST00000426478 338 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RPL23AP52-201ENST00000439311 478 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AC013470.1-201ENST00000453438 462 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 snoU13.1-201ENST00000459157 104 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RN7SKP210-201ENST00000459176 261 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 RN7SL98P-201ENST00000462271 300 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AL049874.1-201ENST00000489560 388 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AC091144.1-201ENST00000519573 138 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AP002770.2-201ENST00000543613 532 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 MIR3133-201ENST00000583157 78 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 AL161629.2-201ENST00000615347 275 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 NCAPGP1-201ENST00000505112 1814 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 OR4G2P-202ENST00000641004 1759 ntBASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP4E1Q9UPM8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 RNU6-545P-201ENST00000362681 104 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 RNA5SP175-201ENST00000364275 119 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.358-201ENST00000365491 99 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 RNU6-1074P-201ENST00000383995 104 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 MIR514A1-201ENST00000385133 98 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 SNORD66.1-201ENST00000391230 76 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 SNORA11F-201ENST00000408237 128 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 ELOCP19-201ENST00000411919 318 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC245028.1-201ENST00000423259 256 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 ABCF2P2-201ENST00000450549 296 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 FABP5P15-201ENST00000453566 214 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 RPL23AP24-201ENST00000458203 385 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 RN7SL810P-201ENST00000493031 276 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 RNU6-612P-201ENST00000516909 102 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC010186.2-204ENST00000537668 439 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 CBX3P4-201ENST00000538909 354 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 MIR4643-201ENST00000577473 78 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC002545.1-201ENST00000592511 181 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 SRGNP1-201ENST00000603392 451 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 MIR6820-201ENST00000611508 62 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 U2.14-201ENST00000615943 113 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AC140479.6-201ENST00000633535 357 ntBASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.49□□□□□ -1.69
AP4E1Q9UPM8 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 RNU6-356P-201ENST00000384140 107 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AL022722.2-201ENST00000402519 180 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 MTCO1P39-201ENST00000426148 480 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.644-201ENST00000459006 113 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 RN7SL459P-201ENST00000481078 302 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.674-201ENST00000516362 113 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 Y_RNA.703-201ENST00000516846 111 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AC022868.1-201ENST00000517767 391 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AC104581.2-201ENST00000572227 430 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AC005046.1-201ENST00000608515 625 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 AC139713.2-214ENST00000642059 1811 ntBASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
AP4E1Q9UPM8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.47□□□□□ -1.69
AP4E1Q9UPM8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms