Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 HSPE1P11-201ENST00000339579 310 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MIR448-201ENST00000362131 111 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RNU6-490P-201ENST00000362985 107 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MIR320B1-201ENST00000390209 79 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AL138885.1-201ENST00000405921 675 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RNA5SP39-201ENST00000411245 120 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 SAGE2P-201ENST00000420011 2126 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC243428.1-201ENST00000421099 264 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC002381.1-201ENST00000447049 280 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 HMGB3P21-201ENST00000452483 547 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC104472.2-201ENST00000469035 601 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RPS26P15-201ENST00000488067 348 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC116337.1-201ENST00000509680 687 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RNU6-138P-201ENST00000515952 107 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RNU6-1069P-201ENST00000516612 133 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RN7SKP96-201ENST00000516948 297 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RNA5SP337-201ENST00000517007 109 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC131281.1-201ENST00000522984 164 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 OR5D17P-201ENST00000531492 978 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 HSPE1P20-201ENST00000538133 289 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MIR548AI-201ENST00000579940 88 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MIR4276-201ENST00000584832 70 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MTCO1P7-201ENST00000419523 1542 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC007685.1-201ENST00000329806 452 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.222-201ENST00000364264 102 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.288-201ENST00000364854 92 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 U3.19-201ENST00000390893 196 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 EIF4E2P1-201ENST00000393781 255 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 DHFRP6-201ENST00000401776 268 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RN7SKP222-201ENST00000410651 315 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AL160275.2-201ENST00000412010 394 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 HMGN1P24-201ENST00000412282 298 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RNU6-1132P-201ENST00000459214 107 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 RFPL4AP3-201ENST00000515267 345 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 IGHV3-76-201ENST00000522465 295 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 GNAI2P1-201ENST00000541815 315 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 MIR5583-1-201ENST00000580941 59 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC105224.1-201ENST00000587055 421 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 uc_338.34-201ENST00000617467 174 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC018692.3-201ENST00000623929 123 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AL159972.1-201ENST00000625150 448 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 AC091812.1-201ENST00000432235 1948 ntBASIC2.63□□□□□ -1.99
NOTCH3Q9UM47 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 TNPO1P3-201ENST00000436471 2662 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RNU6-212P-201ENST00000362642 104 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RNA5SP197-201ENST00000363357 119 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 SNORD27-201ENST00000363981 72 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RNA5SP424-201ENST00000390988 115 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AC110754.1-201ENST00000399740 601 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 U3.39-201ENST00000408569 239 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RNU2-38P-201ENST00000410856 79 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RPL21P38-201ENST00000418090 167 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AC012065.2-201ENST00000421295 375 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 SNAP23P1-201ENST00000433229 246 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RPS20P5-201ENST00000434808 360 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 FCF1P4-201ENST00000448326 183 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 PCMTD1P1-201ENST00000455560 355 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RNU7-182P-201ENST00000459009 62 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RNU7-180P-201ENST00000459240 63 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AC093852.1-201ENST00000503587 266 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 SNORA25.11-201ENST00000515935 105 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 snoU109.6-201ENST00000516831 118 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AC040926.1-201ENST00000530195 238 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AC104695.3-201ENST00000604052 296 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AC245517.5-201ENST00000611529 162 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 MTND5P6-201ENST00000422338 1798 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 AL445437.1-201ENST00000623157 3087 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.26-201ENST00000362539 101 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 SNORA80A-201ENST00000363922 136 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.212-201ENST00000364177 102 ntBASIC2.62□□□□□ -1.99
NOTCH3Q9UM47 RNA5SP42-201ENST00000364278 115 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms