Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC010653.1-201ENST00000571108 881 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC024619.4-201ENST00000580924 316 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 DPPA3P3-201ENST00000603842 430 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC013553.2-201ENST00000604244 589 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC068944.2-201ENST00000610373 403 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC012409.4-201ENST00000612923 249 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 MIR3688-2-201ENST00000636963 87 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 AC103988.1-201ENST00000566382 2177 ntBASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HDAC6Q9UBN7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 RNU6-996P-201ENST00000365438 107 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 FAT1P1-201ENST00000406588 507 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 Z85995.1-201ENST00000415547 335 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 SNRPEP10-201ENST00000420249 274 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 HSPE1P1-201ENST00000421494 318 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC093106.2-201ENST00000428212 385 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AL606489.2-201ENST00000433886 234 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 SNRPEP4-201ENST00000435815 279 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 MTND4P25-201ENST00000441039 533 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 RPS12P18-201ENST00000442381 270 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 FABP5P13-201ENST00000452144 328 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC006512.1-201ENST00000468816 291 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AL121769.1-201ENST00000469473 401 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AL163973.1-201ENST00000484753 577 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 RPL39P36-201ENST00000490784 156 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC091826.1-201ENST00000514065 313 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 RNU6-143P-201ENST00000516942 93 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 OR5B19P-201ENST00000531766 928 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 NRBF2P5-201ENST00000603087 788 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 RPL12P50-201ENST00000603116 116 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC104458.1-201ENST00000608243 463 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AP001596.2-201ENST00000608410 312 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 MTND1P37-201ENST00000636562 264 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AC008264.2-201ENST00000610193 3731 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 MTND5P19-201ENST00000424872 1794 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 AL359693.1-201ENST00000614959 2407 ntBASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.38□□□□□ -1.87
HDAC6Q9UBN7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 RNU6-1167P-201ENST00000363227 94 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 Y_RNA.255-201ENST00000364581 97 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 SNORD115-7-201ENST00000365306 82 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 SNORD115-47-201ENST00000391226 86 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 U3.42-201ENST00000408746 214 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 RNU4-46P-201ENST00000410818 138 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 MTCO1P20-201ENST00000425366 358 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AL591212.2-201ENST00000433923 257 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AL596276.1-201ENST00000434465 418 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 Z82210.1-201ENST00000440037 231 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AL135938.1-201ENST00000443141 297 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AL590639.1-201ENST00000456484 337 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 RNA5SP356-201ENST00000515972 94 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 RNU6-685P-201ENST00000517088 95 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AC007536.1-201ENST00000533382 349 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 GTF3AP2-201ENST00000557014 266 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AC008945.2-201ENST00000606056 604 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 AL354950.2-201ENST00000617939 290 ntBASIC3.37□□□□□ -1.87
HDAC6Q9UBN7 FER-210ENST00000628534 558 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms