Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MTCYBP10-201ENST00000424905 650 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC008267.5-201ENST00000424928 265 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AL356535.1-201ENST00000440335 398 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC011816.1-201ENST00000441346 546 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RANP8-201ENST00000444720 713 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 PCMTD1P1-201ENST00000455560 355 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RPL21P13-201ENST00000488305 481 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC146944.2-203ENST00000502493 354 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC139495.1-202ENST00000513164 354 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 SNORA31.8-201ENST00000516327 108 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 SCARNA16.2-201ENST00000516520 172 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-1256P-201ENST00000516539 103 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-1137P-201ENST00000517073 99 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 RNA5SP291-201ENST00000517222 105 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC004024.1-201ENST00000549244 247 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 BNIP3P16-201ENST00000589779 534 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 AC010733.2-201ENST00000589496 5702 ntBASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PPARGC1AQ9UBK2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.2-201ENST00000362330 96 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RN7SKP227-201ENST00000364445 330 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 Y_RNA.245-201ENST00000364493 95 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-196P-201ENST00000384315 107 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-306P-201ENST00000384617 107 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 PPIAP31-201ENST00000405422 495 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RPL21P65-201ENST00000406094 466 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL096701.2-201ENST00000416920 238 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 SYF2P2-201ENST00000417620 583 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL133396.1-201ENST00000432048 687 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC099799.1-201ENST00000439809 192 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RPL23AP62-201ENST00000463396 453 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-475P-201ENST00000516073 104 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-764P-201ENST00000516396 105 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-264P-201ENST00000517134 104 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 SNORD116.3-201ENST00000517176 78 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RN7SKP289-201ENST00000517244 295 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC010653.1-201ENST00000571108 881 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL132822.1-201ENST00000617063 513 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AF117829.1-206ENST00000621883 3802 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL773545.4-201ENST00000637262 310 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL513478.4-201ENST00000641636 310 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 AL672296.1-201ENST00000427780 2158 ntBASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
PPARGC1AQ9UBK2 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 MIR372-201ENST00000362225 67 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-1309P-201ENST00000363305 108 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 RNA5SP322-201ENST00000363617 119 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-842P-201ENST00000384269 107 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AL445529.1-201ENST00000398713 389 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 MIR548F4-201ENST00000408515 105 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 RNU6-1025P-201ENST00000410629 104 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AL030996.1-201ENST00000411430 235 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AL691449.1-201ENST00000426570 421 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AL117339.2-201ENST00000430475 180 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 MYL8P-204ENST00000431574 518 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 RPS23P3-201ENST00000470993 430 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC022493.2-201ENST00000506122 481 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 HMGN1P11-201ENST00000508668 303 ntBASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.12□□□□□ -1.75
PPARGC1AQ9UBK2 RNU1-86P-201ENST00000516108 154 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms