Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 HMGB1P9-201ENST00000429856 646 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 MRPS17P3-201ENST00000465453 385 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 RNU6-928P-201ENST00000516876 104 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AC007349.4-201ENST00000608114 532 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AC016911.1-201ENST00000613297 452 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 AC005832.2-201ENST00000538921 1430 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 DBF4P1-201ENST00000412976 1892 ntBASIC1.16□□□□□ -2.22
PHRF1Q9P1Y6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 SNORA16B-201ENST00000364674 135 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 RPS3AP24-201ENST00000407896 734 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 RNU2-43P-201ENST00000410306 190 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 RNA5SP193-201ENST00000410353 107 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 PNRC2P1-201ENST00000423940 420 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 PSMA6P3-201ENST00000428242 164 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 RPL26P6-201ENST00000440913 438 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC005410.1-202ENST00000460347 485 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC005908.1-201ENST00000468701 347 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC114786.4-201ENST00000508771 728 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC114797.1-201ENST00000514003 728 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 RNA5SP121-201ENST00000516537 101 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 BNIP3P24-201ENST00000593398 557 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 AL109918.3-201ENST00000603072 338 ntBASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
PHRF1Q9P1Y6 ZNF849P-201ENST00000594711 1566 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 MTCO1P23-201ENST00000415223 1526 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 Y_RNA.433-201ENST00000384089 102 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 RNU6-17P-201ENST00000384245 107 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 RNU6-18P-201ENST00000384527 107 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 MIR135A2-201ENST00000384854 100 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 RN7SKP158-201ENST00000410453 326 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC117503.1-201ENST00000472241 394 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 COL6A4P2-205ENST00000509855 506 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 IGJP1-201ENST00000522682 475 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC090502.2-201ENST00000549267 280 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC124947.2-202ENST00000552735 133 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC093519.1-201ENST00000566109 298 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC090132.2-201ENST00000615881 347 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AL109933.3-201ENST00000619095 188 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 AC109454.4-201ENST00000623411 649 ntBASIC1.15□□□□□ -2.23
PHRF1Q9P1Y6 RNU6-1066P-201ENST00000363573 105 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 RNU2-41P-201ENST00000410991 178 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AL050341.1-201ENST00000447743 313 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 NDUFA5P7-201ENST00000452914 242 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 MTND2P6-201ENST00000455337 1030 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 RPS20P20-201ENST00000460498 340 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC107626.1-201ENST00000471084 183 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC138853.1-201ENST00000503549 823 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC118282.2-201ENST00000508739 374 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 RNU6-551P-201ENST00000516661 103 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 SNORA48.10-201ENST00000516965 160 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AP005902.1-201ENST00000521358 186 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC078899.2-201ENST00000595282 212 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 AC003001.2-201ENST00000616294 831 ntBASIC1.14□□□□□ -2.23
PHRF1Q9P1Y6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 NDUFB4P7-201ENST00000423198 363 ntBASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 MTND4LP14-201ENST00000429447 288 ntBASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 RNU6-970P-201ENST00000516312 107 ntBASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 SNORA31.22-201ENST00000517204 135 ntBASIC1.13□□□□□ -2.23
PHRF1Q9P1Y6 SNORA31.25-201ENST00000517242 134 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms