Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX56Q9NY93 RNU6-1303P-201ENST00000364841 107 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 RNU1-100P-201ENST00000365255 165 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 SNORA57.3-201ENST00000411095 141 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 AC009414.1-201ENST00000427200 443 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 OSTCP8-201ENST00000445117 448 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 RPS29P31-201ENST00000446147 164 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 snoU109.2-201ENST00000459316 135 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 AC107626.1-201ENST00000471084 183 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 RN7SL132P-201ENST00000478131 296 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 RNU6-581P-201ENST00000516214 105 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 RNU6-579P-201ENST00000516879 102 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 SNORA25.17-201ENST00000517184 124 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 PARP1P2-201ENST00000556806 195 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 AC136624.4-201ENST00000573044 370 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 MIR4738-201ENST00000579134 87 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.81□□□□□ -1.8
DDX56Q9NY93 AP000787.2-201ENST00000604432 568 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 ATP1B3P1-201ENST00000605365 821 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 RNU1-30P-201ENST00000606575 163 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX56Q9NY93 ATP5A1P2-202ENST00000616464 443 ntBASIC3.81□□□□□ -1.8
DDX56Q9NY93 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.81□□□□□ -1.8
DDX56Q9NY93 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX56Q9NY93 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC092435.3-201ENST00000565538 3654 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AL049781.1-201ENST00000623195 3585 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 RNA5SP42-201ENST00000364278 115 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 MIR147B-201ENST00000390185 80 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 BX323014.1-201ENST00000412876 237 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 ATG3P1-201ENST00000419507 911 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 MTND4LP11-201ENST00000422184 280 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AL139247.1-201ENST00000422768 325 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC097713.2-201ENST00000430199 356 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC007547.1-201ENST00000462177 490 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AL133162.1-201ENST00000463228 453 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 RPL23AP14-201ENST00000468281 468 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 GZMAP1-201ENST00000503054 631 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 Y_RNA.687-201ENST00000516558 91 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 AL118558.2-201ENST00000556294 238 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC007224.1-201ENST00000564410 144 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC008739.2-201ENST00000597006 317 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AL391813.1-201ENST00000603098 260 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 AC008121.1-201ENST00000603244 268 ntBASIC3.8□□□□□ -1.8
DDX56Q9NY93 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX56Q9NY93 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
DDX56Q9NY93 Y_RNA.373-201ENST00000365600 103 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 RNU6-748P-201ENST00000384648 107 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 RNU6-332P-201ENST00000391193 108 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 RPL30P16-201ENST00000419341 429 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 RPS15AP6-201ENST00000420703 385 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX56Q9NY93 HMGN2P26-201ENST00000463169 339 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX56Q9NY93 SEM1P1-201ENST00000506694 209 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 SNORA19.2-201ENST00000516013 114 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 RNU6-358P-201ENST00000516564 75 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 ACA59.2-201ENST00000517061 156 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 AC109479.2-201ENST00000517842 174 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 RPL7P20-201ENST00000520308 745 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX56Q9NY93 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
DDX56Q9NY93 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX56Q9NY93 AC091152.3-201ENST00000604227 325 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 Z69720.2-201ENST00000624755 279 ntBASIC3.79□□□□□ -1.8
DDX56Q9NY93 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX56Q9NY93 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX56Q9NY93 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
DDX56Q9NY93 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
DDX56Q9NY93 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
DDX56Q9NY93 RNU6-858P-201ENST00000362436 107 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 RNU5E-7P-201ENST00000365290 117 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 RPL32P23-201ENST00000397237 405 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 AL096701.2-201ENST00000416920 238 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 AL139413.1-201ENST00000421309 217 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.78□□□□□ -1.8
DDX56Q9NY93 MTND4P18-201ENST00000447010 465 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 AL590639.1-201ENST00000456484 337 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 RN7SL601P-201ENST00000471221 293 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
DDX56Q9NY93 AC026784.1-201ENST00000507986 352 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 TBCAP3-201ENST00000512475 312 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 AC087854.1-201ENST00000519706 414 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 AF235103.2-201ENST00000525753 346 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 AP000763.2-201ENST00000540641 163 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.78□□□□□ -1.8
DDX56Q9NY93 AC006077.1-201ENST00000604746 343 ntBASIC3.78□□□□□ -1.8
DDX56Q9NY93 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.78□□□□□ -1.8
DDX56Q9NY93 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms