Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 ROCK1P1-201ENST00000573767 549 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC098848.2-201ENST00000588023 330 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC002545.1-201ENST00000592511 181 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC073413.2-201ENST00000604332 360 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC069545.1-201ENST00000605671 358 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AL390208.1-201ENST00000605885 644 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.15□□□□□ -2.23
SCN3AQ9NY46 AC004908.2-201ENST00000609090 574 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 MIR8084-201ENST00000614105 89 ntBASIC1.15□□□□□ -2.23
SCN3AQ9NY46 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.14□□□□□ -2.23
SCN3AQ9NY46 RNU6-884P-201ENST00000363889 107 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 RNU6-878P-201ENST00000384578 110 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AP002784.2-201ENST00000397300 549 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 MTATP6P27-201ENST00000416987 621 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 MED14P1-201ENST00000430517 648 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SCN3AQ9NY46 HMGN2P10-201ENST00000448085 265 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 COX6CP18-201ENST00000448769 222 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC079776.3-201ENST00000450665 370 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC080013.2-201ENST00000460866 323 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 MRPS17P3-201ENST00000465453 385 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC006512.1-201ENST00000468816 291 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 MTCYBP35-201ENST00000503630 1137 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.14□□□□□ -2.23
SCN3AQ9NY46 Y_RNA.670-201ENST00000516255 105 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 RNU2-44P-201ENST00000516795 194 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC022784.5-201ENST00000522241 437 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC084364.2-201ENST00000546924 395 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC090079.2-201ENST00000575289 768 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC024619.4-201ENST00000580924 316 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC068276.1-201ENST00000605793 379 ntBASIC1.14□□□□□ -2.23
SCN3AQ9NY46 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.14□□□□□ -2.23
SCN3AQ9NY46 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SCN3AQ9NY46 RNU6-353P-201ENST00000364266 108 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 SNORA40.19-201ENST00000390846 128 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC068050.1-201ENST00000394891 380 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 RPL7P27-201ENST00000403775 720 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AL355994.1-201ENST00000424379 260 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 MTND5P25-201ENST00000430499 799 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AP000949.1-201ENST00000438328 629 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 RNU7-140P-201ENST00000459546 60 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 RPS27AP10-201ENST00000496103 208 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 MTCYBP16-201ENST00000509187 1129 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 NRON-201ENST00000517270 370 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 MTCO3P15-201ENST00000526563 574 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC010975.3-201ENST00000618727 978 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 MIR6515-201ENST00000619843 57 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 OR5T3-201ENST00000303059 1023 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 MIR934-201ENST00000401241 83 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 RNU2-49P-201ENST00000410666 184 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 RPS12P24-201ENST00000412619 387 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 RPL26P27-201ENST00000414397 437 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 DPRXP1-201ENST00000426312 460 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 MTCYBP32-201ENST00000427945 1084 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC093155.1-201ENST00000440164 826 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC034244.1-201ENST00000507687 207 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 HIGD1AP17-201ENST00000554576 276 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC011451.2-201ENST00000604303 598 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 AC104820.1-201ENST00000624183 307 ntBASIC1.13□□□□□ -2.23
SCN3AQ9NY46 RNU4-91P-201ENST00000364778 135 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 RNU6-19P-201ENST00000384718 107 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AL356432.1-201ENST00000405809 419 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AC096920.1-201ENST00000423991 241 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 USP9YP18-201ENST00000425912 695 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AC007919.1-201ENST00000429380 217 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN3AQ9NY46 DDX3P2-201ENST00000446138 111 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AC009474.2-201ENST00000451383 136 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AL049874.1-201ENST00000489560 388 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AC020699.1-201ENST00000505161 445 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AC107953.1-201ENST00000522216 297 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AP003497.1-201ENST00000528472 562 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.12□□□□□ -2.23
SCN3AQ9NY46 NACAP3-201ENST00000552100 481 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 MIR3912-201ENST00000577566 105 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AP001542.1-201ENST00000591314 200 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.12□□□□□ -2.23
SCN3AQ9NY46 WISP1-OT1-201ENST00000602893 642 ntBASIC1.12□□□□□ -2.23
SCN3AQ9NY46 AL138963.2-201ENST00000605137 226 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms