Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 OR51A5P-201ENST00000415429 942 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AL592045.1-201ENST00000429867 352 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC010095.1-201ENST00000443543 144 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AL353705.4-201ENST00000449661 238 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC092001.1-201ENST00000453012 261 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC091951.3-201ENST00000504093 246 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC008526.1-201ENST00000509149 338 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 CBX3P7-201ENST00000532876 502 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC078814.3-201ENST00000553036 491 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC007229.1-201ENST00000590455 412 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 KC877982.1-201ENST00000602313 470 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 MTCYBP22-201ENST00000603788 447 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC007363.1-201ENST00000604736 620 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC068276.1-201ENST00000605793 379 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 MIR6134-201ENST00000617606 109 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 U6.99-201ENST00000637524 83 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 AC103706.2-201ENST00000638080 240 ntBASIC2.11□□□□□ -2.07
KLHL28Q9NXS3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 RNY4P24-201ENST00000362735 96 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 Z98749.2-208ENST00000381646 500 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 RNU1-148P-201ENST00000384472 162 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 RNU6-584P-201ENST00000410350 95 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 HMGB1P11-201ENST00000413899 637 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC107081.1-201ENST00000414975 361 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 MTND1P32-201ENST00000433043 938 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 MTND4P25-201ENST00000441039 533 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AF213884.2-201ENST00000510417 903 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 RNU6-143P-201ENST00000516942 93 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 MTCYBP20-201ENST00000524239 1129 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC009063.1-201ENST00000563342 702 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AL356432.3-201ENST00000568952 465 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 BNIP3P9-201ENST00000603714 553 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AL121917.1-203ENST00000605534 577 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC022960.3-201ENST00000619794 441 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
KLHL28Q9NXS3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 U3.37-201ENST00000408528 213 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 USP9YP27-201ENST00000418455 438 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 RAC1P6-201ENST00000423911 575 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC016691.1-201ENST00000441321 413 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 RPL22P13-201ENST00000493291 347 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 RPS29P21-201ENST00000496272 170 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 TPT1P8-201ENST00000510120 555 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 MRPS33P3-201ENST00000513456 322 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 RNU6-415P-201ENST00000516252 97 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC009902.1-201ENST00000519351 183 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 MTATP6P15-201ENST00000527233 835 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC084851.1-201ENST00000529105 249 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 PRELID2P1-201ENST00000552837 301 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 MIR4782-201ENST00000577987 79 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 MIR4307-201ENST00000582802 84 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL670379.6-201ENST00000603753 252 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL670379.11-201ENST00000604059 253 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC104763.2-201ENST00000604179 382 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC008162.1-201ENST00000604718 254 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL670379.1-201ENST00000604752 252 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL670379.5-201ENST00000605253 252 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL670379.12-201ENST00000605291 253 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL670379.8-201ENST00000605353 252 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL670379.7-201ENST00000605823 252 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC027449.1-201ENST00000608890 407 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AC092106.3-201ENST00000611308 722 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL139418.1-201ENST00000613613 177 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AP001486.3-201ENST00000615334 372 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 U4atac.1-201ENST00000618345 95 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 AL359757.2-201ENST00000624309 274 ntBASIC2.09□□□□□ -2.07
KLHL28Q9NXS3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms