Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC009233.1-201ENST00000616477 371 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 AC131280.1-202ENST00000624067 4211 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 TEX21P-201ENST00000447107 1476 ntBASIC1.86□□□□□ -2.11
CLN6Q9NWW5 MTND4P16-201ENST00000466108 1367 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 RNU6-931P-201ENST00000363850 107 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 RNU6-898P-201ENST00000365627 104 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 Z98749.2-208ENST00000381646 500 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 RNU6-157P-201ENST00000383957 107 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 MIR301A-201ENST00000385261 86 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AL445529.1-201ENST00000398713 389 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 BTF3P7-201ENST00000407097 488 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AL354692.1-201ENST00000423044 315 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AL831737.1-201ENST00000441288 271 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 HIGD1AP2-201ENST00000446367 280 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 BTF3P15-201ENST00000455606 336 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 SNORD97-201ENST00000459187 142 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC112771.1-201ENST00000463581 102 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 MTND1P3-201ENST00000484956 952 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC018437.1-201ENST00000492214 406 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC008413.1-201ENST00000511864 177 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 SNORA31.25-201ENST00000517242 134 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC009902.1-201ENST00000519351 183 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC087276.1-201ENST00000529659 480 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC023050.2-201ENST00000544968 387 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 LINC00933-203ENST00000559812 219 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC026790.2-201ENST00000606282 430 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 FRG1KP-201ENST00000623592 341 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC010608.3-201ENST00000625048 527 ntBASIC1.85□□□□□ -2.11
CLN6Q9NWW5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLN6Q9NWW5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 RNA5SP289-201ENST00000362332 137 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 RNY3P13-201ENST00000365542 102 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 SNORA11.4-201ENST00000408823 129 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 RNU2-62P-201ENST00000410868 191 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AL353621.1-201ENST00000418219 243 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 MTCO2P21-201ENST00000419780 677 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AL353706.1-201ENST00000436728 494 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AL451074.3-201ENST00000437709 472 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 CYP2C59P-201ENST00000457790 269 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC140059.1-201ENST00000489238 361 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 SNORA31.19-201ENST00000517079 126 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 MIR3146-201ENST00000580367 79 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 AC021755.4-201ENST00000616620 456 ntBASIC1.84□□□□□ -2.11
CLN6Q9NWW5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.84□□□□□ -2.11
CLN6Q9NWW5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 ZNF658B-202ENST00000615961 3375 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 Y_RNA.46-201ENST00000362695 102 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 RNA5SP240-201ENST00000365355 128 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 RNU6-83P-201ENST00000384568 112 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 FCF1P10-201ENST00000407590 479 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 RNU2-40P-201ENST00000410833 196 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 MTCO2P23-201ENST00000425216 680 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AL591212.2-201ENST00000433923 257 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AL078601.1-201ENST00000444542 271 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AL009048.1-201ENST00000450437 298 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC022493.1-201ENST00000492984 337 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC091951.3-201ENST00000504093 246 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 RNU6-677P-201ENST00000516914 101 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC079598.5-201ENST00000547460 117 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.83□□□□□ -2.12
CLN6Q9NWW5 ARL2BPP2-201ENST00000550907 489 ntBASIC1.83□□□□□ -2.12
CLN6Q9NWW5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms