Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AL356535.1-201ENST00000440335 398 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 MTND1P17-201ENST00000448961 204 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 RBMY2UP-201ENST00000453474 324 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 RNU1-86P-201ENST00000516108 154 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 RNU1-107P-201ENST00000516617 154 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 SNORA70.24-201ENST00000517233 118 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AC009902.1-201ENST00000519351 183 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 CASP1P1-201ENST00000526345 212 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AC107016.1-201ENST00000550463 337 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 TRAV37-201ENST00000553906 342 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AL110115.1-201ENST00000614396 364 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 AL672296.1-201ENST00000427780 2158 ntBASIC3.75□□□□□ -1.81
TDP1Q9NUW8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TDP1Q9NUW8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AL359693.1-201ENST00000614959 2407 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 MIR491-201ENST00000384877 84 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC007677.1-201ENST00000445757 515 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 HMGN2P16-201ENST00000456802 261 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 SNORD19B-201ENST00000459623 84 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AL135752.1-201ENST00000479477 471 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 RPS4XP13-201ENST00000483219 789 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 RPL32P34-201ENST00000486380 400 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 HMGB1P30-201ENST00000492455 606 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC139453.3-201ENST00000493276 369 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC079140.5-201ENST00000507882 310 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC026784.1-201ENST00000507986 352 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 RPL39P5-202ENST00000512505 151 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 RNU6-559P-201ENST00000516151 98 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 SNORA70.18-201ENST00000516696 98 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 RNA5SP165-201ENST00000517142 115 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC087854.1-201ENST00000519706 414 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 FRG2DP-202ENST00000566967 323 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC007151.1-201ENST00000572774 483 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AL355365.1-201ENST00000616480 294 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AL359757.2-201ENST00000624309 274 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TDP1Q9NUW8 AL049641.1-201ENST00000441055 1948 ntBASIC3.74□□□□□ -1.81
TDP1Q9NUW8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 MAPK10-373ENST00000641983 6772 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC138393.1-203ENST00000327086 343 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RNU6-562P-201ENST00000362731 107 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RNA5SP267-201ENST00000364893 126 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RNU6-128P-201ENST00000383976 107 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 MIR483-201ENST00000385070 76 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AL360182.1-201ENST00000397433 468 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RNU2-37P-201ENST00000410695 177 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RPL37P10-201ENST00000412884 288 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC092047.1-201ENST00000424997 240 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RPL7P37-201ENST00000425095 738 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AL512844.2-201ENST00000433990 593 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC236972.2-201ENST00000434979 310 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 HMGB1P12-201ENST00000438594 598 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 HMGN2P7-201ENST00000456186 273 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RPS27P27-201ENST00000498779 255 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RN7SKP24-201ENST00000515888 284 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 SNORA70.14-201ENST00000516205 110 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC025423.5-201ENST00000550230 219 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC004805.2-201ENST00000605382 482 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AL133255.1-201ENST00000606374 441 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RMST_4.1-201ENST00000616886 107 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC007742.2-201ENST00000618226 398 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC091953.5-201ENST00000622919 233 ntBASIC3.73□□□□□ -1.81
TDP1Q9NUW8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.73□□□□□ -1.81
TDP1Q9NUW8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms