Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RNU6-835P-201ENST00000516974 104 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC103783.1-201ENST00000520506 373 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AP002360.4-201ENST00000606980 481 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC004067.1-201ENST00000608733 700 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.11□□□□□ -1.91
UPF2Q9HAU5 AC093648.1-201ENST00000623546 606 ntBASIC3.11□□□□□ -1.91
UPF2Q9HAU5 ZNF680P1-201ENST00000436625 1469 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RNU6-534P-201ENST00000364877 106 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 SNORA23-201ENST00000365128 182 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RNU6-76P-201ENST00000384060 104 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 SNORA36C-201ENST00000384289 132 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RNU6-908P-201ENST00000410160 94 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RNU2-9P-201ENST00000410194 145 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RPL21P24-201ENST00000413752 448 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 TIMM9P3-201ENST00000428659 274 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RPL35AP22-201ENST00000436855 335 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 MTATP6P23-201ENST00000440153 476 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 MTCO3P45-201ENST00000443036 613 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC234775.1-201ENST00000454247 670 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC008481.1-201ENST00000463278 396 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 MTAPP1-201ENST00000489154 819 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC026801.2-201ENST00000515352 425 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 SNORA31.1-201ENST00000515993 133 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 SNORA31.5-201ENST00000516190 133 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RNA5SP282-201ENST00000516355 108 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AP003034.1-201ENST00000534621 422 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC234778.2-201ENST00000566241 354 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 SNORA59B-202ENST00000578183 701 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC138761.3-201ENST00000579993 334 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC024619.4-201ENST00000580924 316 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 Z84480.1-201ENST00000605131 311 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AC093788.1-201ENST00000609356 927 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 MIR1321-201ENST00000637766 79 ntBASIC3.1□□□□□ -1.91
UPF2Q9HAU5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.1□□□□□ -1.91
UPF2Q9HAU5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 HSPE1P11-201ENST00000339579 310 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.9-201ENST00000362354 101 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.38-201ENST00000362617 102 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 RNU6-1097P-201ENST00000363586 107 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 Y_RNA.303-201ENST00000364998 94 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 RNY3P14-201ENST00000384309 102 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 UBA52P6-201ENST00000399822 382 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 MIR1277-201ENST00000408536 78 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 RNA5SP38-201ENST00000410750 119 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 RNU2-62P-201ENST00000410868 191 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 ELOCP14-201ENST00000428070 331 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AL606489.2-201ENST00000433886 234 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 ELOCP7-201ENST00000439968 331 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC116353.2-201ENST00000505332 712 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 RNA5SP402-201ENST00000517148 110 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC022080.3-201ENST00000544433 482 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AL157687.1-201ENST00000554853 619 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 RPS3AP4-201ENST00000555161 764 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AL512360.1-201ENST00000555346 234 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AL359212.1-201ENST00000556608 614 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC025678.1-201ENST00000567861 338 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 MIR4325-201ENST00000583049 90 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC098848.2-201ENST00000588023 330 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AP000907.4-201ENST00000604143 237 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AL035413.2-201ENST00000604801 525 ntBASIC3.09□□□□□ -1.91
UPF2Q9HAU5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms