Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC093303.1-201ENST00000514549 295 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 RNU6-914P-201ENST00000516749 109 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.720-201ENST00000517166 92 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC022634.1-201ENST00000520765 532 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 COPS8P3-201ENST00000526024 482 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 SNRPGP18-201ENST00000553000 214 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MIR5692A1-201ENST00000580523 69 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MIR3942-201ENST00000585264 109 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MIR15A-201ENST00000607334 83 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL390240.1-201ENST00000612950 384 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC091925.1-201ENST00000623204 462 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC244517.12-201ENST00000623581 663 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC008725.1-201ENST00000605123 2263 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LRFN3Q9BTN0 AL049641.1-201ENST00000441055 1948 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.28-201ENST00000362554 111 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.187-201ENST00000363918 113 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 RNU6-1013P-201ENST00000384180 107 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.530-201ENST00000384587 101 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 SNORD96B-201ENST00000386148 79 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 MIR548K-201ENST00000408406 116 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 U3.42-201ENST00000408746 214 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC092809.3-201ENST00000415453 231 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 RAC1P3-201ENST00000416129 580 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 YPEL5P1-201ENST00000419731 367 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 SNRPEP4-201ENST00000435815 279 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 PRPS1P1-201ENST00000445305 876 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 RNA5SP341-201ENST00000516261 117 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 RNU7-143P-201ENST00000516781 65 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC063950.1-201ENST00000552036 308 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 VN1R107P-201ENST00000601784 209 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 CYP2C61P-201ENST00000604072 290 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AC009570.1-201ENST00000609599 745 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 AL512643.1-201ENST00000635735 524 ntBASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
LRFN3Q9BTN0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 RNU6-82P-201ENST00000363970 107 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 RNU6-512P-201ENST00000364438 103 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 Y_RNA.534-201ENST00000384599 112 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 SNORA1.3-201ENST00000384676 136 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 RNU6-331P-201ENST00000384724 107 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AL591034.1-201ENST00000407447 340 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AL137792.2-201ENST00000443484 235 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 RBMY2UP-201ENST00000453474 324 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 RPL27AP5-201ENST00000469428 449 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC083904.1-201ENST00000487828 231 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 RNU6-1088P-201ENST00000516850 104 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 COX6CP5-201ENST00000527162 228 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AL118558.2-201ENST00000556294 238 ntBASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.84□□□□□ -1.79
LRFN3Q9BTN0 MIR4503-201ENST00000582187 83 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms