Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SSX3Q99909 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SSX3Q99909 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSX3Q99909 Y_RNA.33-201ENST00000362591 102 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 RNU6-179P-201ENST00000363350 107 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SSX3Q99909 SNORD116-1-201ENST00000384335 95 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 NDUFB4P4-201ENST00000404822 243 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX3Q99909 AC022018.1-201ENST00000430685 241 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX3Q99909 GPR143P-201ENST00000434155 205 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 RPS20P5-201ENST00000434808 360 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 MTCO2P16-201ENST00000436962 677 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 HMGN2P10-201ENST00000448085 265 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC233279.1-201ENST00000455300 423 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC126389.1-201ENST00000477436 290 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.51□□□□□ -2.01
SSX3Q99909 AC116562.3-201ENST00000506136 177 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.51□□□□□ -2.01
SSX3Q99909 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX3Q99909 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 AC008885.1-201ENST00000514930 301 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 RNU6-123P-201ENST00000516163 102 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 RNU6-1183P-201ENST00000517054 60 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX3Q99909 PSMA2P1-201ENST00000526365 646 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC068587.5-201ENST00000528506 175 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 AC022080.3-201ENST00000544433 482 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.51□□□□□ -2.01
SSX3Q99909 AC012213.3-201ENST00000577199 777 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 MIR3913-1-201ENST00000577744 102 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.51□□□□□ -2.01
SSX3Q99909 AL391813.1-201ENST00000603098 260 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC024153.1-201ENST00000603103 365 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC007938.3-201ENST00000604965 623 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC006566.1-201ENST00000608943 513 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC109347.2-201ENST00000610220 349 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 MIR3670-4-201ENST00000612260 65 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC010678.1-201ENST00000614118 713 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC138649.3-201ENST00000622154 254 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AC024940.5-201ENST00000622889 474 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
SSX3Q99909 AC010329.5-201ENST00000623497 2174 ntBASIC2.51□□□□□ -2.01
SSX3Q99909 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSX3Q99909 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 AC103710.2-202ENST00000641454 2853 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 SNORA71.1-201ENST00000364523 117 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 RNU1-140P-201ENST00000365040 165 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 RNU6-395P-201ENST00000365662 106 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 Y_RNA.553-201ENST00000384670 102 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 CISD1P1-201ENST00000393907 327 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SSX3Q99909 USP9YP6-201ENST00000413550 854 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX3Q99909 PIGFP2-201ENST00000421400 651 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AC007560.1-201ENST00000426912 237 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 MTATP6P16-201ENST00000434543 526 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AL031667.1-201ENST00000440222 725 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 RPS12P18-201ENST00000442381 270 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 MTND2P22-201ENST00000444325 1033 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AL360221.1-201ENST00000445989 335 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 MTCYBP1-201ENST00000454315 1119 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 KLF3P2-201ENST00000465138 268 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 S100A11P2-201ENST00000467589 312 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.5□□□□□ -2.01
SSX3Q99909 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.5□□□□□ -2.01
SSX3Q99909 MTCO3P28-201ENST00000513351 515 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 SNORA31.19-201ENST00000517079 126 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AC009812.2-201ENST00000517657 457 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 MTCYBP20-201ENST00000524239 1129 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AP001646.1-201ENST00000527936 915 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AC006199.1-201ENST00000548728 219 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.5□□□□□ -2.01
SSX3Q99909 AL049779.4-201ENST00000604500 156 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AC126118.1-201ENST00000607744 628 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AC100793.4-201ENST00000613683 429 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AC025034.2-201ENST00000623264 286 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 AL157786.1-207ENST00000627771 695 ntBASIC2.5□□□□□ -2.01
SSX3Q99909 CU459211.1-201ENST00000635667 749 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms