Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 Y_RNA.252-201ENST00000364556 101 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 RNU6-1074P-201ENST00000383995 104 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 MIR200C-201ENST00000384980 68 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 RAB9AP3-201ENST00000412737 573 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 AC080125.1-201ENST00000414888 684 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
TIMP4Q99727 AC079780.1-201ENST00000428259 207 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 AC096644.2-201ENST00000429278 159 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 GOT2P5-201ENST00000433995 546 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 PRDX3P3-201ENST00000447765 522 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 RAB9AP1-201ENST00000449393 573 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 RPL37P6-201ENST00000460682 294 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.47□□□□□ -1.85
TIMP4Q99727 MTCO2P24-201ENST00000515611 426 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 SCARNA14-201ENST00000516903 136 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 AC110588.1-201ENST00000559699 137 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 MIR4444-1-201ENST00000581696 74 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 MIR4444-2-201ENST00000584390 74 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.47□□□□□ -1.85
TIMP4Q99727 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
TIMP4Q99727 AC011494.1-201ENST00000596454 237 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 NUTF2P8-201ENST00000604593 363 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 MIR92B-201ENST00000607575 96 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.47□□□□□ -1.85
TIMP4Q99727 MIR4275-201ENST00000636486 87 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 AC012442.3-202ENST00000636742 206 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TIMP4Q99727 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TIMP4Q99727 HSPA8P1-201ENST00000425843 1833 ntBASIC3.47□□□□□ -1.85
TIMP4Q99727 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.46□□□□□ -1.85
TIMP4Q99727 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TIMP4Q99727 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TIMP4Q99727 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 ZNF285B-201ENST00000561698 1767 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TIMP4Q99727 MIR423-201ENST00000362201 94 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 Y_RNA.47-201ENST00000362697 108 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 Y_RNA.496-201ENST00000384444 101 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 U8.11-201ENST00000384699 133 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 U8.12-201ENST00000384701 133 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 MIR199A2-201ENST00000385289 110 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 RNU6-817P-201ENST00000391083 104 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 HLFP1-201ENST00000402375 499 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 MIR548F4-201ENST00000408515 105 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AC008267.5-201ENST00000424928 265 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AL591419.1-201ENST00000427423 339 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC097713.2-201ENST00000430199 356 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 RPL26P6-201ENST00000440913 438 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 HMGB3P30-201ENST00000457863 606 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 U8.18-201ENST00000459285 133 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 TRBV12-2-201ENST00000489763 344 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC015911.1-201ENST00000495111 156 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 MTND3P25-201ENST00000509243 135 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 SNORA31.3-201ENST00000516029 96 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 RNU6-914P-201ENST00000516749 109 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC022695.1-201ENST00000522089 237 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 ERHP1-201ENST00000523006 310 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC104576.1-201ENST00000524225 88 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AC087499.8-201ENST00000578406 226 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.46□□□□□ -1.86
TIMP4Q99727 MIR5692A1-201ENST00000580523 69 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AL355598.1-201ENST00000604169 202 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC124312.5-201ENST00000604451 268 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.46□□□□□ -1.86
TIMP4Q99727 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TIMP4Q99727 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.86
TIMP4Q99727 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.46□□□□□ -1.86
TIMP4Q99727 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TIMP4Q99727 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TIMP4Q99727 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TIMP4Q99727 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TIMP4Q99727 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.45□□□□□ -1.86
TIMP4Q99727 RNA5SP124-201ENST00000362739 110 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 RNU6-490P-201ENST00000362985 107 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 RNU6-238P-201ENST00000363313 106 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 Y_RNA.149-201ENST00000363558 117 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 Y_RNA.151-201ENST00000363566 112 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TIMP4Q99727 Y_RNA.428-201ENST00000384078 102 ntBASIC3.45□□□□□ -1.86
TIMP4Q99727 Y_RNA.452-201ENST00000384202 108 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms