Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AP1S2P1-201ENST00000457344 379 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 RPL7P18-201ENST00000478965 734 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 AC090096.1-201ENST00000489168 390 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.02□□□□□ -2.09
CDX2Q99626 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.02□□□□□ -2.09
CDX2Q99626 RNA5SP216-201ENST00000516111 123 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 SNORA31.11-201ENST00000516528 139 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX2Q99626 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX2Q99626 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX2Q99626 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.02□□□□□ -2.09
CDX2Q99626 MIR3117-201ENST00000584034 78 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.02□□□□□ -2.09
CDX2Q99626 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDX2Q99626 BCRP9-201ENST00000605312 388 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 AL137847.3-201ENST00000611521 109 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 AP003399.1-201ENST00000637534 361 ntBASIC2.02□□□□□ -2.09
CDX2Q99626 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
CDX2Q99626 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CDX2Q99626 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.01□□□□□ -2.09
CDX2Q99626 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
CDX2Q99626 RNU6-636P-201ENST00000384598 107 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 CCNG1P1-201ENST00000406783 885 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 RNU6-516P-201ENST00000411381 104 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 USP9YP26-201ENST00000421008 661 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 ARPC3P1-201ENST00000437218 533 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AL117351.1-201ENST00000438864 766 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.01□□□□□ -2.09
CDX2Q99626 USP9YP25-201ENST00000457708 443 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDX2Q99626 AC091951.3-201ENST00000504093 246 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 RNA5SP102-201ENST00000516865 106 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC105185.1-201ENST00000518705 535 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 MTCO2P15-201ENST00000532655 656 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX2Q99626 AC135279.1-201ENST00000543493 504 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC007115.1-201ENST00000546853 234 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 MIR5694-201ENST00000581190 76 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC004223.2-201ENST00000590309 544 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.01□□□□□ -2.09
CDX2Q99626 AC021171.1-201ENST00000603137 706 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AL353778.1-201ENST00000603149 408 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AL645944.1-201ENST00000603857 493 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC107952.2-201ENST00000606048 486 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX2Q99626 AC012150.2-201ENST00000621300 544 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 AC073308.1-201ENST00000623696 305 ntBASIC2.01□□□□□ -2.09
CDX2Q99626 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX2Q99626 RNU6-83P-201ENST00000384568 112 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2□□□□□ -2.09
CDX2Q99626 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2□□□□□ -2.09
CDX2Q99626 AC092447.3-201ENST00000426027 686 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2□□□□□ -2.09
CDX2Q99626 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2□□□□□ -2.09
CDX2Q99626 RPL35AP22-201ENST00000436855 335 ntBASIC2□□□□□ -2.09
CDX2Q99626 MTND4LP16-201ENST00000440828 295 ntBASIC2□□□□□ -2.09
CDX2Q99626 FGF7P5-201ENST00000441829 291 ntBASIC2□□□□□ -2.09
CDX2Q99626 MTCO3P45-201ENST00000443036 613 ntBASIC2□□□□□ -2.09
CDX2Q99626 PTENP1-201ENST00000447117 1215 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2□□□□□ -2.09
CDX2Q99626 AL139109.1-201ENST00000455491 297 ntBASIC2□□□□□ -2.09
CDX2Q99626 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2□□□□□ -2.09
CDX2Q99626 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2□□□□□ -2.09
CDX2Q99626 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2□□□□□ -2.09
CDX2Q99626 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2□□□□□ -2.09
CDX2Q99626 MTAPP1-201ENST00000489154 819 ntBASIC2□□□□□ -2.09
CDX2Q99626 HMGN1P7-201ENST00000491722 313 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC138853.1-201ENST00000503549 823 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC098862.1-201ENST00000504991 413 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2□□□□□ -2.09
CDX2Q99626 LTV1P1-201ENST00000510683 1237 ntBASIC2□□□□□ -2.09
CDX2Q99626 RN7SKP287-201ENST00000516546 266 ntBASIC2□□□□□ -2.09
CDX2Q99626 RNA5SP402-201ENST00000517148 110 ntBASIC2□□□□□ -2.09
CDX2Q99626 COX6CP5-201ENST00000527162 228 ntBASIC2□□□□□ -2.09
CDX2Q99626 DUXAP5-201ENST00000529668 529 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2□□□□□ -2.09
CDX2Q99626 AL359212.1-201ENST00000556608 614 ntBASIC2□□□□□ -2.09
CDX2Q99626 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2□□□□□ -2.09
CDX2Q99626 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2□□□□□ -2.09
CDX2Q99626 AC093424.1-201ENST00000604999 338 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC126118.1-201ENST00000607744 628 ntBASIC2□□□□□ -2.09
CDX2Q99626 OR10AB1P-201ENST00000609613 938 ntBASIC2□□□□□ -2.09
CDX2Q99626 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2□□□□□ -2.09
CDX2Q99626 FTX_3.1-201ENST00000610451 147 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC010133.1-201ENST00000615809 842 ntBASIC2□□□□□ -2.09
CDX2Q99626 AP000484.1-201ENST00000620067 1252 ntBASIC2□□□□□ -2.09
CDX2Q99626 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2□□□□□ -2.09
CDX2Q99626 PCMTD1P7-201ENST00000634506 357 ntBASIC2□□□□□ -2.09
CDX2Q99626 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2□□□□□ -2.09
CDX2Q99626 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2□□□□□ -2.09
CDX2Q99626 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDX2Q99626 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDX2Q99626 RNU6-223P-201ENST00000362830 107 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 SNORA4.1-201ENST00000364263 144 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 SNORD114-22-201ENST00000365423 72 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 MIR19A-201ENST00000384878 82 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 AL139397.2-201ENST00000404529 772 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.99□□□□□ -2.09
CDX2Q99626 MTCO1P17-201ENST00000411522 491 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms