Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 BNIP3P27-201ENST00000599991 412 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.74□□□□□ -2.13
VAT1Q99536 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 AP006437.1-201ENST00000641440 3685 ntBASIC1.74□□□□□ -2.13
VAT1Q99536 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
VAT1Q99536 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
VAT1Q99536 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.73□□□□□ -2.13
VAT1Q99536 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.73□□□□□ -2.13
VAT1Q99536 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
VAT1Q99536 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
VAT1Q99536 RNU1-72P-201ENST00000362976 153 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RNU6-188P-201ENST00000364207 107 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 MIR320C1-201ENST00000408566 88 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RNU2-63P-201ENST00000410792 194 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AL359704.1-201ENST00000411586 781 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.73□□□□□ -2.13
VAT1Q99536 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.73□□□□□ -2.13
VAT1Q99536 EDDM3CP-201ENST00000415977 425 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RPS24P7-201ENST00000416921 246 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AC097463.2-201ENST00000421074 142 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RPS25P9-201ENST00000435591 252 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RSU1P2-202ENST00000437884 485 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.73□□□□□ -2.13
VAT1Q99536 PPP1R2P5-201ENST00000457256 603 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RPL37P6-201ENST00000460682 294 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AC108729.1-201ENST00000487812 947 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RPL22P13-201ENST00000493291 347 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.73□□□□□ -2.13
VAT1Q99536 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.73□□□□□ -2.13
VAT1Q99536 RNU6-276P-201ENST00000516114 96 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RNU6-250P-201ENST00000516958 103 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RNU6-1183P-201ENST00000517054 60 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 RNU6-64P-201ENST00000517119 105 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.73□□□□□ -2.13
VAT1Q99536 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.73□□□□□ -2.13
VAT1Q99536 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.73□□□□□ -2.13
VAT1Q99536 AC090897.2-201ENST00000581715 130 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.73□□□□□ -2.13
VAT1Q99536 MIR4293-201ENST00000584305 78 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.73□□□□□ -2.13
VAT1Q99536 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.73□□□□□ -2.13
VAT1Q99536 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 AC109809.1-201ENST00000619665 545 ntBASIC1.73□□□□□ -2.13
VAT1Q99536 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
VAT1Q99536 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.72□□□□□ -2.13
VAT1Q99536 Z98749.2-208ENST00000381646 500 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.72□□□□□ -2.13
VAT1Q99536 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.72□□□□□ -2.13
VAT1Q99536 HMGB3P12-201ENST00000438745 556 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 RPL7P12-201ENST00000446719 750 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 RPL21P134-201ENST00000453468 483 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 RPL36AP48-201ENST00000485521 314 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 AC107032.1-201ENST00000485945 480 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 AC011005.2-201ENST00000487324 359 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.72□□□□□ -2.13
VAT1Q99536 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.72□□□□□ -2.13
VAT1Q99536 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.72□□□□□ -2.13
VAT1Q99536 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.72□□□□□ -2.13
VAT1Q99536 AC109445.1-201ENST00000512356 383 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 RNU6-467P-201ENST00000517027 110 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 AC012213.3-201ENST00000577199 777 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 MIR3126-201ENST00000577443 74 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.72□□□□□ -2.13
VAT1Q99536 AL355297.2-201ENST00000604792 129 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 PART1_2.1-201ENST00000612397 250 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 AC022202.1-201ENST00000613515 211 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 MIR5739-201ENST00000619803 80 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 AL136313.1-201ENST00000624804 202 ntBASIC1.72□□□□□ -2.13
VAT1Q99536 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.72□□□□□ -2.13
VAT1Q99536 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.71□□□□□ -2.13
VAT1Q99536 RNU6-748P-201ENST00000384648 107 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 MIR676-201ENST00000390702 67 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 ERHP2-201ENST00000402323 299 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.71□□□□□ -2.14
VAT1Q99536 OR51A5P-201ENST00000415429 942 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.71□□□□□ -2.14
VAT1Q99536 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.71□□□□□ -2.14
VAT1Q99536 snoU13.15-201ENST00000459407 104 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 RPL23AP42-201ENST00000471152 471 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.71□□□□□ -2.14
VAT1Q99536 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.71□□□□□ -2.14
VAT1Q99536 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VAT1Q99536 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.71□□□□□ -2.14
VAT1Q99536 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.71□□□□□ -2.14
VAT1Q99536 AC233702.2-202ENST00000562547 291 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 MIR4529-201ENST00000578110 78 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.71□□□□□ -2.14
VAT1Q99536 AC104763.2-201ENST00000604179 382 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.71□□□□□ -2.14
VAT1Q99536 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
VAT1Q99536 MIR6845-201ENST00000613182 61 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 U6.99-201ENST00000637524 83 ntBASIC1.71□□□□□ -2.14
VAT1Q99536 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VAT1Q99536 CDC27P3-201ENST00000635418 1910 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 SNORA26.9-201ENST00000391322 122 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 RN7SKP266-201ENST00000410232 287 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 VN1R51P-201ENST00000411675 945 ntBASIC1.7□□□□□ -2.14
VAT1Q99536 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms