Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL445264.1-201ENST00000621719 171 ntBASIC1.44□□□□□ -2.18
CCDC42Q96M95 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC42Q96M95 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC42Q96M95 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CCDC42Q96M95 RNU6-1167P-201ENST00000363227 94 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC42Q96M95 AL591034.2-201ENST00000402839 359 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC078974.1-201ENST00000411597 223 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 DPRXP1-201ENST00000426312 460 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC42Q96M95 AL121601.2-201ENST00000438019 707 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC42Q96M95 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC093801.2-201ENST00000503966 1050 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC008269.2-201ENST00000561915 1105 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC023813.2-201ENST00000564321 469 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC068338.1-201ENST00000565567 176 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 RMST_6.1-201ENST00000611980 203 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC243773.3-201ENST00000613270 256 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC008121.3-201ENST00000618726 433 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC42Q96M95 AP005901.5-201ENST00000545779 1796 ntBASIC1.43□□□□□ -2.18
CCDC42Q96M95 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC42Q96M95 AC107982.1-201ENST00000507171 1300 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC42Q96M95 RNU6-223P-201ENST00000362830 107 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 SNORA67.5-201ENST00000391036 107 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 MIR1283-2-201ENST00000408621 87 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 BX664727.1-201ENST00000416024 466 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 SEPT7P5-201ENST00000434048 306 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 AF038458.1-201ENST00000588406 262 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC42Q96M95 AC073544.2-201ENST00000601155 540 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 AC016925.2-201ENST00000605108 242 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 AC008759.3-201ENST00000613300 508 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 AC021755.4-201ENST00000616620 456 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 AL359314.1-201ENST00000616913 261 ntBASIC1.42□□□□□ -2.18
CCDC42Q96M95 RNU6-97P-201ENST00000363387 104 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 RNU6-343P-201ENST00000364709 104 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC42Q96M95 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC42Q96M95 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 COX7BP2-201ENST00000437976 242 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AP000949.1-201ENST00000438328 629 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 snoU13.15-201ENST00000459407 104 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 MTCYBP18-201ENST00000501056 747 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC42Q96M95 AC110760.3-202ENST00000515177 371 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC42Q96M95 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC42Q96M95 AP000873.5-201ENST00000533906 236 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AC122134.1-202ENST00000569111 1201 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC42Q96M95 AL161798.1-201ENST00000604630 131 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AC018638.7-201ENST00000605836 1114 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AC013412.1-201ENST00000610687 192 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 AC138627.2-201ENST00000624202 601 ntBASIC1.41□□□□□ -2.18
CCDC42Q96M95 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC42Q96M95 OR5T3-201ENST00000303059 1023 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 NACAP2-201ENST00000318548 624 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 RNU1-23P-201ENST00000363361 144 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
CCDC42Q96M95 RNA5SP465-201ENST00000391195 109 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 MIR1289-2-201ENST00000408360 111 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC009310.1-201ENST00000414414 451 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 MTND2P20-201ENST00000440805 661 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC020550.1-201ENST00000447385 163 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 ARPC3P5-201ENST00000448802 534 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC092001.1-201ENST00000453012 261 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 FABP5P15-201ENST00000453566 214 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 RNU1-123P-201ENST00000458950 160 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC112771.1-201ENST00000463581 102 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC008379.1-201ENST00000463655 464 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC021382.1-201ENST00000483523 359 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC098862.1-201ENST00000504991 413 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC121161.1-201ENST00000510606 652 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 RPL23AP94-201ENST00000512518 302 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 RNU6-581P-201ENST00000516214 105 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC42Q96M95 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC42Q96M95 AP003033.1-201ENST00000527244 415 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 PSMA3P-201ENST00000555485 635 ntBASIC1.4□□□□□ -2.19
CCDC42Q96M95 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC42Q96M95 AL356432.3-201ENST00000568952 465 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms