Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RN7SKP256-201ENST00000517201 314 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 RNU6-711P-201ENST00000517255 106 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC106782.4-201ENST00000568264 210 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 MIR3942-201ENST00000585264 109 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC024220.1-201ENST00000603675 484 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AL121757.2-201ENST00000611223 313 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AL512643.1-201ENST00000635735 524 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 AC009093.8-201ENST00000641769 292 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 ZNF807-201ENST00000328088 1707 ntBASIC3.49□□□□□ -1.85
VPS50Q96JG6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS50Q96JG6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS50Q96JG6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS50Q96JG6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC121333.1-201ENST00000567488 2709 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 RNA5SP124-201ENST00000362739 110 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 U8.11-201ENST00000384699 133 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 U8.12-201ENST00000384701 133 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 MIR325-201ENST00000385260 98 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 RN7SKP53-201ENST00000411337 315 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC063979.1-201ENST00000415539 377 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 RPL21P90-201ENST00000415692 466 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 HSPE1P1-201ENST00000421494 318 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AL591704.1-201ENST00000432574 275 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 RPL23AP22-201ENST00000437556 453 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AL360271.2-201ENST00000447710 161 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 PPP1R2P5-201ENST00000457256 603 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 U8.18-201ENST00000459285 133 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC087884.1-201ENST00000469738 328 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 RPL7P43-201ENST00000478876 753 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC106707.2-201ENST00000484182 374 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 SNORD59.2-201ENST00000516873 68 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 SCARNA14-201ENST00000516903 136 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 RNU6-273P-201ENST00000516937 96 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC090136.1-201ENST00000520009 240 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC105029.1-201ENST00000520250 669 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AP000763.2-201ENST00000540641 163 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC093027.1-201ENST00000546698 429 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC090115.3-201ENST00000553218 849 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC073539.2-201ENST00000597113 165 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC012119.1-201ENST00000603184 222 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 SNORA62.6-201ENST00000606322 83 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS50Q96JG6 AL132765.2-201ENST00000610812 351 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC009233.1-201ENST00000616477 371 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC002076.2-201ENST00000617362 122 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 AC103705.1-201ENST00000619013 241 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 TPTEP1-208ENST00000636884 213 ntBASIC3.48□□□□□ -1.85
VPS50Q96JG6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 RNU6-82P-201ENST00000363970 107 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 SNORD46.1-201ENST00000364139 104 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 Y_RNA.414-201ENST00000384011 101 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 Y_RNA.509-201ENST00000384506 99 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 RNA5SP44-201ENST00000410446 133 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 ARL5AP1-201ENST00000418991 388 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 USP9YP20-201ENST00000419224 558 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AL356867.1-201ENST00000429623 299 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 PRSS3P4-201ENST00000453323 162 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 TRBV1-201ENST00000476502 284 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 RNU6-189P-201ENST00000516120 101 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC068657.1-201ENST00000520807 306 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC005498.1-201ENST00000592125 465 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC243960.4-201ENST00000600532 288 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC008962.1-201ENST00000605729 304 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC012314.7-201ENST00000619693 93 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 RMST_7.1-201ENST00000621935 268 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 AC006111.3-201ENST00000622137 383 ntBASIC3.47□□□□□ -1.85
VPS50Q96JG6 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VPS50Q96JG6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS50Q96JG6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms