Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.97
PDLIM5Q96HC4 AC010329.5-201ENST00000623497 2174 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RNU6-169P-201ENST00000365336 107 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RNU1-109P-201ENST00000383960 147 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 MIR181A2-201ENST00000384863 110 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RNU6-817P-201ENST00000391083 104 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 U3.26-201ENST00000391236 204 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RNU6-648P-201ENST00000410190 107 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RNU2-8P-201ENST00000410727 190 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC127391.1-201ENST00000411737 98 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC007283.2-201ENST00000424739 197 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AL353729.1-201ENST00000425044 720 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RPL31P35-201ENST00000431058 377 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AL445687.1-201ENST00000439946 251 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AL671855.1-201ENST00000446875 1203 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC132479.1-201ENST00000449160 144 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 MTND1P12-201ENST00000455231 147 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 S100A11P2-201ENST00000467589 312 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RPS3AP17-201ENST00000472594 777 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 RNA5SP337-201ENST00000517007 109 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC011979.2-201ENST00000527568 352 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AL391840.1-201ENST00000571144 367 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 MIR4325-201ENST00000583049 90 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC245014.2-201ENST00000603689 287 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 BNIP3P9-201ENST00000603714 553 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC246785.4-201ENST00000605374 287 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AF250324.2-201ENST00000608299 610 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC103710.2-201ENST00000609912 942 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AL133173.2-201ENST00000614270 90 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC124864.2-201ENST00000624736 186 ntBASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PDLIM5Q96HC4 AC004520.1-201ENST00000608362 1413 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RNU1-140P-201ENST00000365040 165 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RNU6-282P-201ENST00000365357 103 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RNU6-1103P-201ENST00000384150 107 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 GSTA9P-201ENST00000406231 611 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RPL35AP12-201ENST00000425362 338 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 SKA2P1-201ENST00000425592 390 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 MTCO3P30-201ENST00000426425 670 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 C8orf59P1-201ENST00000429930 303 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC022018.1-201ENST00000430685 241 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RPS20P5-201ENST00000434808 360 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RPL23AP20-201ENST00000447965 421 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC098591.2-201ENST00000510152 315 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RNA5SP341-201ENST00000516261 117 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RNU2-10P-201ENST00000516375 211 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RNU6-506P-201ENST00000516553 94 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 Vault.3-201ENST00000516676 95 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 SNORD19.2-201ENST00000516978 73 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 RNU6-1220P-201ENST00000517126 108 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC022616.3-201ENST00000523940 148 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AP006587.4-201ENST00000526053 529 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 TPRKBP2-201ENST00000565969 475 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC024619.4-201ENST00000580924 316 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC024153.1-201ENST00000603103 365 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC104763.2-201ENST00000604179 382 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC007684.1-201ENST00000609671 477 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AL442067.2-201ENST00000614033 363 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AL137003.2-201ENST00000606924 2538 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 AC135776.4-201ENST00000624300 1904 ntBASIC2.76□□□□□ -1.97
PDLIM5Q96HC4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC027514.1-201ENST00000588561 1603 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 RNU6-181P-201ENST00000363225 107 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 SNORD46.1-201ENST00000364139 104 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 RNU6-658P-201ENST00000384606 106 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AL356057.2-201ENST00000403318 432 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 FCF1P9-201ENST00000412546 282 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 RPS15AP12-201ENST00000419498 388 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 MTCO2P11-201ENST00000431069 680 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AL139132.1-201ENST00000431587 344 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 RPL39P40-201ENST00000445481 146 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 C1DP4-201ENST00000455429 424 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 MTCO2P29-201ENST00000465212 189 ntBASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM5Q96HC4 AC003982.1-202ENST00000469928 248 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms