Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.74□□□□□ -2.29
TTC28Q96AY4 FAM60BP-201ENST00000578364 658 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AL109918.3-201ENST00000603072 338 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 AC004852.3-201ENST00000614131 326 ntBASIC0.74□□□□□ -2.29
TTC28Q96AY4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.74□□□□□ -2.29
TTC28Q96AY4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC016716.1-201ENST00000265882 708 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 ENSAP3-201ENST00000312710 333 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 SNORA23-201ENST00000365128 182 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 XKRYP1-201ENST00000423438 492 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 MTCO3P46-201ENST00000425787 232 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 XKRYP2-201ENST00000432915 492 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC005908.1-201ENST00000468701 347 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 RPS27P21-201ENST00000486977 252 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 RPS27P23-201ENST00000487608 251 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 SCARNA11.3-201ENST00000517276 130 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 CYCSP26-201ENST00000534107 320 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 HMGB1P14-201ENST00000557424 591 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 MIR378F-201ENST00000578143 78 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC021749.1-201ENST00000604322 607 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC079791.1-201ENST00000605356 973 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC025588.4-201ENST00000615802 908 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AL162373.1-201ENST00000620433 407 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC079597.1-201ENST00000624306 508 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC005592.1-201ENST00000566527 1640 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 RNU6-374P-201ENST00000364146 108 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 SNORA67.1-201ENST00000364749 141 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 RNU6-920P-201ENST00000410926 92 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC092047.1-201ENST00000424997 240 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 SDCBPP1-201ENST00000440192 890 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC104164.3-201ENST00000467363 1258 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC015724.1-201ENST00000478577 156 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC112518.2-201ENST00000508565 425 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 RNU6-798P-201ENST00000516912 103 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 SUB1P1-201ENST00000524415 382 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC107214.2-201ENST00000608204 634 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC110792.4-201ENST00000609843 298 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 AC018926.3-201ENST00000618841 406 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.73□□□□□ -2.29
TTC28Q96AY4 U6.107-201ENST00000637108 79 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 MTND4P27-201ENST00000450813 1354 ntBASIC0.73□□□□□ -2.29
TTC28Q96AY4 RNY4P6-201ENST00000363667 96 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 U3.20-201ENST00000390909 217 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 TAAR7P-201ENST00000436141 242 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AL589880.1-201ENST00000448271 287 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 RNU7-23P-201ENST00000459465 62 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TTC28Q96AY4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TTC28Q96AY4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TTC28Q96AY4 MRPS17P9-201ENST00000511924 393 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TTC28Q96AY4 SNORA31.23-201ENST00000517219 133 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 RNU2-19P-201ENST00000517288 84 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC008749.1-201ENST00000597650 306 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC012669.1-201ENST00000603209 283 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AP002826.1-201ENST00000608835 315 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC009318.4-201ENST00000620496 486 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC011330.2-201ENST00000621680 635 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AL590396.2-201ENST00000636511 1041 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC009950.2-201ENST00000636548 183 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 RNU1-62P-201ENST00000362599 164 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 RNU6-444P-201ENST00000383988 108 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 RNA5SP63-201ENST00000391225 112 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 RPS3AP24-201ENST00000407896 734 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AL133384.1-201ENST00000412744 351 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC093155.1-201ENST00000440164 826 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 KLF3P2-201ENST00000465138 268 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 RNU5A-7P-201ENST00000515979 116 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 MTCYBP27-201ENST00000555160 670 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC006213.4-201ENST00000616184 634 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC027335.2-201ENST00000624030 375 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 AC017104.5-201ENST00000637647 639 ntBASIC0.72□□□□□ -2.29
TTC28Q96AY4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.72□□□□□ -2.29
TTC28Q96AY4 MTND5P11-201ENST00000511037 1812 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TTC28Q96AY4 AL109913.1-201ENST00000421173 514 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.71□□□□□ -2.3
TTC28Q96AY4 MTATP6P7-201ENST00000453315 681 ntBASIC0.71□□□□□ -2.3
TTC28Q96AY4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms