Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MRPL42P6-201ENST00000486397 371 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 MTND4P2-201ENST00000507767 1203 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.54□□□□□ -2
PTP4A1Q93096 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.54□□□□□ -2
PTP4A1Q93096 SCGB1D5P-201ENST00000515134 247 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 RNA5SP341-201ENST00000516261 117 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PTP4A1Q93096 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.54□□□□□ -2
PTP4A1Q93096 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.54□□□□□ -2
PTP4A1Q93096 HPRT1P3-201ENST00000539521 576 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AC079598.5-201ENST00000547460 117 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.54□□□□□ -2
PTP4A1Q93096 MIR4325-201ENST00000583049 90 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 MIR548AC-201ENST00000585049 88 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AC009977.1-201ENST00000586015 570 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AC012065.4-201ENST00000602445 679 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 AL353778.1-201ENST00000603149 408 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 U4atac.1-201ENST00000618345 95 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
PTP4A1Q93096 AC099654.13-201ENST00000639774 207 ntBASIC2.54□□□□□ -2
PTP4A1Q93096 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PTP4A1Q93096 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.53□□□□□ -2
PTP4A1Q93096 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.53□□□□□ -2
PTP4A1Q93096 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.53□□□□□ -2
PTP4A1Q93096 RNU6-858P-201ENST00000362436 107 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 RNA5SP387-201ENST00000364226 106 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 RNA5SP125-201ENST00000364843 120 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 Y_RNA.333-201ENST00000365274 102 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 U3.37-201ENST00000408528 213 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 RN7SKP158-201ENST00000410453 326 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC127391.1-201ENST00000411737 98 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.53□□□□□ -2
PTP4A1Q93096 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.53□□□□□ -2
PTP4A1Q93096 TOMM20P4-201ENST00000427861 435 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 RPS20P5-201ENST00000434808 360 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.53□□□□□ -2
PTP4A1Q93096 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.53□□□□□ -2
PTP4A1Q93096 NDUFB1P2-201ENST00000449477 176 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AL133217.1-201ENST00000450980 425 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AL583843.1-201ENST00000456070 346 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC112771.1-201ENST00000463581 102 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC003982.1-202ENST00000469928 248 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC083906.5-201ENST00000503722 328 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 FAM92A1P2-202ENST00000504766 877 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.53□□□□□ -2
PTP4A1Q93096 SMURF2P1-201ENST00000514992 481 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 SNORA9.3-201ENST00000516383 129 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 Vault.3-201ENST00000516676 95 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.53□□□□□ -2
PTP4A1Q93096 AC092325.1-201ENST00000566449 554 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 BNIP3P22-201ENST00000593399 556 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC126118.1-201ENST00000607744 628 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.53□□□□□ -2
PTP4A1Q93096 AL133173.2-201ENST00000614270 90 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 AC008993.2-201ENST00000631744 806 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 MIR3529-201ENST00000637713 78 ntBASIC2.53□□□□□ -2
PTP4A1Q93096 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTP4A1Q93096 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 RNU1-140P-201ENST00000365040 165 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 RNU6-39P-201ENST00000384344 107 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC005005.2-201ENST00000420779 380 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AL160275.3-201ENST00000423876 471 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 CALM2P2-201ENST00000428512 440 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC073901.1-201ENST00000462471 408 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 S100A11P2-201ENST00000467589 312 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC117522.2-201ENST00000510049 657 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AF213884.2-201ENST00000510417 903 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 TBCAP3-201ENST00000512475 312 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC118465.1-201ENST00000513820 1271 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 RNU6-123P-201ENST00000516163 102 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 SCARNA13-201ENST00000516672 275 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 RNU6-759P-201ENST00000516740 103 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AP004607.1-201ENST00000524456 203 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC074050.1-201ENST00000563247 211 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC019226.2-201ENST00000625973 424 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AP006437.1-201ENST00000641440 3685 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.52□□□□□ -2.01
PTP4A1Q93096 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PTP4A1Q93096 AC096644.4-201ENST00000563417 2912 ntBASIC2.52□□□□□ -2.01
PTP4A1Q93096 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms