Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MIR301A-201ENST00000385261 86 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 MIR1302-3-201ENST00000408128 138 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.41□□□□□ -1.7
BRF1Q92994 SYF2P2-201ENST00000417620 583 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AC114482.1-201ENST00000418010 247 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.41□□□□□ -1.7
BRF1Q92994 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF1Q92994 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF1Q92994 HMGB1P12-201ENST00000438594 598 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF1Q92994 AC011816.1-201ENST00000441346 546 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AL731563.1-201ENST00000442202 214 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 RPS24P13-201ENST00000442520 397 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 RPS24P6-201ENST00000452670 400 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 HMGB1P30-201ENST00000492455 606 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF1Q92994 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
BRF1Q92994 RNU6-475P-201ENST00000516073 104 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 RNA5SP164-201ENST00000516533 110 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 RNU6-143P-201ENST00000516942 93 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 RNU6-264P-201ENST00000517134 104 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.41□□□□□ -1.7
BRF1Q92994 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF1Q92994 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF1Q92994 SUB1P3-201ENST00000564581 315 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF1Q92994 OR1M4P-201ENST00000589199 287 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 SNRPGP15-201ENST00000600149 222 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AC104695.3-201ENST00000604052 296 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF1Q92994 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF1Q92994 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRF1Q92994 AL713922.2-201ENST00000619384 716 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 AC005592.1-201ENST00000566527 1640 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRF1Q92994 AL136964.1-201ENST00000622038 2990 ntBASIC4.41□□□□□ -1.7
BRF1Q92994 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BRF1Q92994 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.4□□□□□ -1.7
BRF1Q92994 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BRF1Q92994 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.4□□□□□ -1.7
BRF1Q92994 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
BRF1Q92994 Y_RNA.47-201ENST00000362697 108 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 Y_RNA.151-201ENST00000363566 112 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 Y_RNA.324-201ENST00000365165 102 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 MT-TG-201ENST00000387429 68 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
BRF1Q92994 Y_RNA.645-201ENST00000391229 102 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 EI24P1-201ENST00000416584 867 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AL139247.1-201ENST00000422768 325 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AC096644.2-201ENST00000429278 159 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AL592045.1-201ENST00000429867 352 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AC099799.1-201ENST00000439809 192 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 FTH1P25-201ENST00000447665 469 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 HMGB3P30-201ENST00000457863 606 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 snoU13.24-201ENST00000458998 104 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF1Q92994 AC022493.1-201ENST00000492984 337 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF1Q92994 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.4□□□□□ -1.71
BRF1Q92994 RN7SKP209-201ENST00000516888 304 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.4□□□□□ -1.71
BRF1Q92994 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF1Q92994 MIR3160-1-201ENST00000577972 85 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
BRF1Q92994 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF1Q92994 PRR13P7-201ENST00000605538 430 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AL591516.1-201ENST00000611326 274 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AL512643.1-201ENST00000635735 524 ntBASIC4.4□□□□□ -1.71
BRF1Q92994 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF1Q92994 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF1Q92994 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRF1Q92994 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRF1Q92994 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRF1Q92994 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF1Q92994 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF1Q92994 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BRF1Q92994 AC010733.2-201ENST00000589496 5702 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.39□□□□□ -1.71
BRF1Q92994 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
BRF1Q92994 RNU6-1167P-201ENST00000363227 94 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 Y_RNA.176-201ENST00000363815 109 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 RNA5SP424-201ENST00000390988 115 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 AL591419.1-201ENST00000427423 339 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 NDUFB1P1-201ENST00000435191 180 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF1Q92994 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF1Q92994 PCMTD1P1-201ENST00000455560 355 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 AC068781.1-201ENST00000488231 618 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.39□□□□□ -1.71
BRF1Q92994 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF1Q92994 RNU6-120P-201ENST00000516077 103 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 SCARNA15.2-201ENST00000516409 127 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 RN7SKP83-201ENST00000516512 178 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 RNA5SP471-201ENST00000516971 106 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 Y_RNA.721-201ENST00000517207 102 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 AC008011.1-201ENST00000545989 227 ntBASIC4.39□□□□□ -1.71
BRF1Q92994 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.39□□□□□ -1.71
BRF1Q92994 AL157871.3-201ENST00000557231 293 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms