Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TM9SF4Q92544 RNU6-552P-201ENST00000362869 119 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 SNORA71.1-201ENST00000364523 117 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 SNORA7.4-201ENST00000384249 137 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 SNORD15B-201ENST00000384714 146 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 RNU6-903P-201ENST00000391270 109 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL139397.2-201ENST00000404529 772 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 RPL36AP53-201ENST00000432891 316 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 RPL23AP31-201ENST00000456160 467 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 VN1R104P-201ENST00000505115 1009 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC018710.1-201ENST00000506509 158 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 RBBP4P6-201ENST00000508098 202 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 RNU6-507P-201ENST00000516045 100 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL138976.2-201ENST00000563989 694 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 MIR4703-201ENST00000577728 79 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL670379.6-201ENST00000603753 252 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL670379.11-201ENST00000604059 253 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC008162.1-201ENST00000604718 254 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL670379.1-201ENST00000604752 252 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL670379.5-201ENST00000605253 252 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL670379.12-201ENST00000605291 253 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL670379.8-201ENST00000605353 252 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AL670379.7-201ENST00000605823 252 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC004832.5-201ENST00000608677 401 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.93□□□□□ -1.94
TM9SF4Q92544 ASNSP3-201ENST00000451989 1306 ntBASIC2.93□□□□□ -1.94
TM9SF4Q92544 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF4Q92544 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF4Q92544 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 API5P2-201ENST00000397055 1498 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AL139276.1-201ENST00000311910 1001 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 Y_RNA.160-201ENST00000363677 92 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 RNU6-173P-201ENST00000364215 104 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 RN7SKP140-201ENST00000411196 284 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 HSPE1P1-201ENST00000421494 318 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 RPL36AP6-201ENST00000435770 321 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AL121601.2-201ENST00000438019 707 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC107083.1-201ENST00000439643 279 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 MTND4P25-201ENST00000441039 533 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 UBE2DNL-203ENST00000474922 222 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 RPL39P36-201ENST00000490784 156 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 MTCO3P9-201ENST00000506989 781 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC098591.2-201ENST00000510152 315 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 SNORD59.2-201ENST00000516873 68 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 RNA5SP503-201ENST00000517047 117 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 RN7SKP258-201ENST00000517151 304 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AF235103.2-201ENST00000525753 346 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 RPL23AP84-201ENST00000571193 464 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC005730.3-201ENST00000583067 366 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AL355810.1-201ENST00000614629 552 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AP001486.3-201ENST00000615334 372 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC006504.8-201ENST00000621046 635 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 FRG1KP-201ENST00000623592 341 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 AC009033.1-201ENST00000624279 431 ntBASIC2.92□□□□□ -1.94
TM9SF4Q92544 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF4Q92544 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.92□□□□□ -1.94
TM9SF4Q92544 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF4Q92544 AL035425.3-201ENST00000564206 4996 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF4Q92544 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF4Q92544 NACAP2-201ENST00000318548 624 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 RNU5A-1-201ENST00000362698 116 ntBASIC2.91□□□□□ -1.94
TM9SF4Q92544 Y_RNA.86-201ENST00000363020 111 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms