Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 HMGN1P28-201ENST00000521340 364 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.9□□□□□ -1.79
SSH3Q8TE77 AL121821.2-201ENST00000556081 394 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.9□□□□□ -1.79
SSH3Q8TE77 BNIP3P25-201ENST00000596023 559 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 CTHRC1P1-201ENST00000605383 469 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.9□□□□□ -1.79
SSH3Q8TE77 AC092807.2-201ENST00000609367 243 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.9□□□□□ -1.79
SSH3Q8TE77 AL136164.4-201ENST00000625013 2135 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 MIR622-201ENST00000638396 96 ntBASIC3.9□□□□□ -1.79
SSH3Q8TE77 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSH3Q8TE77 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SSH3Q8TE77 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSH3Q8TE77 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSH3Q8TE77 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSH3Q8TE77 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSH3Q8TE77 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSH3Q8TE77 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSH3Q8TE77 SNORA54-201ENST00000384281 123 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 Y_RNA.576-201ENST00000384781 102 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 AL359634.1-202ENST00000404721 284 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 RPL21P24-201ENST00000413752 448 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 UBE2FP1-201ENST00000416536 447 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 BTF3L4P3-201ENST00000418879 476 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 USP9YP20-201ENST00000419224 558 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC093106.2-201ENST00000428212 385 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AL162389.1-201ENST00000449233 177 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC008481.1-201ENST00000463278 396 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC006445.1-201ENST00000491925 405 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 RPL7P23-201ENST00000493874 747 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 MTCO1P29-201ENST00000496868 288 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 Y_RNA.654-201ENST00000497848 106 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 RNU6-1038P-201ENST00000516516 104 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 MTND4P7-201ENST00000523876 130 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 FAM60BP-201ENST00000578364 658 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC012493.2-201ENST00000595083 291 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AP001330.4-201ENST00000604350 154 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSH3Q8TE77 MIR8057-201ENST00000620957 69 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AC073346.2-201ENST00000624724 2058 ntBASIC3.89□□□□□ -1.79
SSH3Q8TE77 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSH3Q8TE77 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSH3Q8TE77 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.89□□□□□ -1.79
SSH3Q8TE77 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSH3Q8TE77 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSH3Q8TE77 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 API5P2-201ENST00000397055 1498 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 RNA5SP374-201ENST00000362939 125 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 Y_RNA.315-201ENST00000365117 102 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 Y_RNA.378-201ENST00000365652 113 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AL353729.1-201ENST00000425044 720 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 RPL23AP69-201ENST00000431134 458 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 HMGN2P20-201ENST00000437531 273 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 RPL23AP22-201ENST00000437556 453 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 MTCO3P45-201ENST00000443036 613 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 MTND4P19-201ENST00000446659 478 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 RN7SL432P-201ENST00000484057 298 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC098591.2-201ENST00000510152 315 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC108078.2-201ENST00000510750 236 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC026801.2-201ENST00000515352 425 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 RNA5SP217-201ENST00000515959 91 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 RNU6-864P-201ENST00000516256 108 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 SNORA31.8-201ENST00000516327 108 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC103783.1-201ENST00000520506 373 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 AL137161.1-201ENST00000532231 390 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 POLR3GP2-201ENST00000588366 668 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 AL365204.3-201ENST00000612448 685 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 TUG1_2.1-201ENST00000614234 87 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 SNHG22-203ENST00000617833 660 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 MIR6130-201ENST00000619419 109 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 MTND4P14-201ENST00000435799 1354 ntBASIC3.88□□□□□ -1.79
SSH3Q8TE77 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.88□□□□□ -1.79
SSH3Q8TE77 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SSH3Q8TE77 SRP72P2-201ENST00000344851 1979 ntBASIC3.87□□□□□ -1.79
SSH3Q8TE77 AC091152.2-201ENST00000591628 2569 ntBASIC3.87□□□□□ -1.79
SSH3Q8TE77 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms