Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AC092474.3-201ENST00000603022 568 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 SNORA40.19-201ENST00000390846 128 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 RPL21P24-201ENST00000413752 448 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 MTND5P15-201ENST00000434246 349 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AC107626.1-201ENST00000471084 183 ntBASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.42□□□□□ -2.34
ALMS1Q8TCU4 U3.20-201ENST00000390909 217 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC018437.1-201ENST00000492214 406 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC011260.1-201ENST00000578420 472 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 RNU6-532P-201ENST00000384318 107 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 RPL9P9-202ENST00000466501 579 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC121161.1-201ENST00000510606 652 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 SCARNA1-201ENST00000517138 166 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC013244.2-201ENST00000603396 103 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 RNU6-173P-201ENST00000364215 104 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 RNA5SP299-201ENST00000391203 116 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 MTND4P11-201ENST00000417020 1058 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 MTND6P13-201ENST00000443510 523 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 SNORA48.11-201ENST00000517015 89 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AP001330.4-201ENST00000604350 154 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AL138478.1-201ENST00000612252 832 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC002550.2-201ENST00000621246 394 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
ALMS1Q8TCU4 RNU6-1164P-201ENST00000364428 107 ntBASIC0.4□□□□□ -2.34
ALMS1Q8TCU4 AC013410.2-201ENST00000422627 201 ntBASIC0.4□□□□□ -2.34
ALMS1Q8TCU4 PABPC1P3-201ENST00000469174 459 ntBASIC0.4□□□□□ -2.34
ALMS1Q8TCU4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.4□□□□□ -2.34
ALMS1Q8TCU4 CYP4A27P-201ENST00000567218 190 ntBASIC0.4□□□□□ -2.34
ALMS1Q8TCU4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
ALMS1Q8TCU4 FAM157A-202ENST00000615155 405 ntBASIC0.4□□□□□ -2.34
ALMS1Q8TCU4 Y_RNA.142-201ENST00000363491 102 ntBASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 AC010809.3-201ENST00000621310 641 ntBASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 RNA5SP125-201ENST00000364843 120 ntBASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 FTH1P15-201ENST00000406984 280 ntBASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.4□□□□□ -2.35
ALMS1Q8TCU4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 FGF7P5-201ENST00000441829 291 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 SNRPGP12-201ENST00000449481 213 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 RPS27P22-201ENST00000478056 241 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AC012213.4-201ENST00000606457 354 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AC087821.2-201ENST00000637086 450 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 RNU6-43P-201ENST00000384302 107 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 MIR515-2-201ENST00000384883 83 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 MIR515-1-201ENST00000384884 83 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 RNA5SP266-201ENST00000410273 108 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL161651.1-201ENST00000440882 223 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL590365.1-201ENST00000450788 243 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 RNA5SP112-201ENST00000515937 99 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 Y_RNA.457-201ENST00000384237 111 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 MTCYBP29-201ENST00000436327 1006 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL034418.1-201ENST00000448675 860 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 C1DP3-201ENST00000455013 423 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AC112492.4-201ENST00000456549 352 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 BOLA3P3-201ENST00000505182 232 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AC079140.2-201ENST00000506193 142 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 MIR4802-201ENST00000581881 80 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 RPL21P136-201ENST00000605378 396 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AL121890.5-201ENST00000620848 304 ntBASIC0.39□□□□□ -2.35
ALMS1Q8TCU4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 RNU1-36P-201ENST00000365130 165 ntBASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 AC060773.1-201ENST00000421698 310 ntBASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 MICF-203ENST00000432679 129 ntBASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.38□□□□□ -2.35
ALMS1Q8TCU4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms