Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 Y_RNA.623-201ENST00000411128 95 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 PPBPP1-201ENST00000510807 373 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC067942.3-201ENST00000512025 362 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 SNORA31.20-201ENST00000517111 133 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 MTND6P33-201ENST00000571794 183 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC073410.2-201ENST00000603240 332 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC009779.6-201ENST00000603972 165 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC010900.2-201ENST00000604508 210 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AL161629.2-201ENST00000615347 275 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 uc_338.13-201ENST00000618243 179 ntBASIC4.05□□□□□ -1.76
NUP43Q8NFH3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.05□□□□□ -1.76
NUP43Q8NFH3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 Z75746.1-201ENST00000440243 2080 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.27-201ENST00000362540 103 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 RNU1-108P-201ENST00000362556 161 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.458-201ENST00000384240 102 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 SNORA11F-201ENST00000408237 128 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 RNU2-14P-201ENST00000411053 191 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AC244098.2-201ENST00000422068 99 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 SDAD1P3-201ENST00000427380 333 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 PHBP16-201ENST00000446318 950 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AC013470.1-201ENST00000453438 462 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 RPS29P27-201ENST00000463711 170 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 RPL21P13-201ENST00000488305 481 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 MLLT10P2-201ENST00000506434 249 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 RRN3P3-201ENST00000549207 578 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AC006077.1-201ENST00000604746 343 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AC113403.1-201ENST00000604910 193 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 AC137590.2-201ENST00000619709 240 ntBASIC4.04□□□□□ -1.76
NUP43Q8NFH3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NUP43Q8NFH3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 SNORD27-201ENST00000363981 72 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 RNU6-338P-201ENST00000383888 105 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 Y_RNA.555-201ENST00000384673 110 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 MIR215-201ENST00000384858 110 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 RN7SKP27-201ENST00000410684 333 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 RPL17P36-201ENST00000420302 549 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 MTND3P9-201ENST00000429526 346 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AL627311.1-201ENST00000431514 115 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 MTCO3P29-201ENST00000432119 779 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC004383.1-201ENST00000438135 289 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC010469.2-201ENST00000496412 480 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 RNU6-1256P-201ENST00000516539 103 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 RNU6-612P-201ENST00000516909 102 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC025755.1-201ENST00000521306 278 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AP004371.1-201ENST00000525240 214 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC007458.1-201ENST00000542812 373 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 SRGNP1-201ENST00000603392 451 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC243829.7-201ENST00000633081 225 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 AC083843.3-201ENST00000623679 2186 ntBASIC4.03□□□□□ -1.76
NUP43Q8NFH3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NUP43Q8NFH3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NUP43Q8NFH3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
NUP43Q8NFH3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NUP43Q8NFH3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP43Q8NFH3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.02□□□□□ -1.77
NUP43Q8NFH3 MAPK10-349ENST00000641767 3661 ntBASIC4.02□□□□□ -1.77
NUP43Q8NFH3 MIR335-201ENST00000362173 94 ntBASIC4.02□□□□□ -1.77
NUP43Q8NFH3 snoU2_19.2-201ENST00000363024 80 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms