Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC008379.1-201ENST00000463655 464 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AC121161.1-201ENST00000510606 652 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 MIR3609-201ENST00000582661 80 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AC022387.2-201ENST00000604050 448 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AP000654.2-201ENST00000605633 586 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AC009974.1-201ENST00000608881 455 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AC093838.1-201ENST00000613014 469 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AL360181.4-201ENST00000621752 134 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 AC068787.1-201ENST00000623908 691 ntBASIC0.76□□□□□ -2.29
CFAP43Q8NDM7 RNU6-263P-201ENST00000363811 107 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 MIR493-201ENST00000385254 89 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 MTCO3P12-201ENST00000416718 547 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 RPL9P9-202ENST00000466501 579 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 SNORA48.9-201ENST00000516419 162 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 SCARNA3-201ENST00000517097 143 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AC092192.1-201ENST00000633154 1018 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 MTCO3P4-201ENST00000419236 787 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 MICF-203ENST00000432679 129 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AL714022.1-201ENST00000439897 151 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AC116337.2-201ENST00000477662 156 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AC010186.2-204ENST00000537668 439 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AC011260.1-201ENST00000578420 472 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 HMGN1P30-201ENST00000589286 268 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 AC091925.2-201ENST00000625059 256 ntBASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CFAP43Q8NDM7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 U3.13-201ENST00000364804 214 ntBASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 PNPLA4P1-201ENST00000458328 305 ntBASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 MIR3126-201ENST00000577443 74 ntBASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 MIR548Y-201ENST00000582739 110 ntBASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 AL355877.2-201ENST00000603670 358 ntBASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 FAM157A-202ENST00000615155 405 ntBASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 AL121890.5-201ENST00000620848 304 ntBASIC0.74□□□□□ -2.29
CFAP43Q8NDM7 RNU5D-1-201ENST00000363299 116 ntBASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 RNU6-1197P-201ENST00000391183 107 ntBASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 SNRPEP7-201ENST00000438350 220 ntBASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 AL590365.1-201ENST00000450788 243 ntBASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 AC107626.1-201ENST00000471084 183 ntBASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 AL590410.1-201ENST00000617925 333 ntBASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 AL049737.1-201ENST00000413920 1403 ntBASIC0.73□□□□□ -2.29
CFAP43Q8NDM7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 MTCO1P3-201ENST00000429327 192 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 SCARNA1-201ENST00000517138 166 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 AC074051.3-201ENST00000570238 358 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 BNIP3P25-201ENST00000596023 559 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 MTND4LP5-201ENST00000605152 292 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 RNU6-697P-201ENST00000363348 107 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 RPL21P24-201ENST00000413752 448 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 Z95118.1-201ENST00000421372 247 ntBASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.72□□□□□ -2.29
CFAP43Q8NDM7 AC010329.5-201ENST00000623497 2174 ntBASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 Y_RNA.136-201ENST00000363444 102 ntBASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 MIR518A2-201ENST00000384966 87 ntBASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 AC068276.1-201ENST00000605793 379 ntBASIC0.71□□□□□ -2.3
CFAP43Q8NDM7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 RNA5SP125-201ENST00000364843 120 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 PIGPP2-201ENST00000411569 458 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 AC114737.2-201ENST00000421583 173 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 RNU6-420P-201ENST00000458780 107 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 UBL5P1-201ENST00000507979 193 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 MED28P6-201ENST00000558776 231 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 LINC00557-201ENST00000563184 1279 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 AC025588.2-201ENST00000604851 466 ntBASIC0.7□□□□□ -2.3
CFAP43Q8NDM7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CFAP43Q8NDM7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CFAP43Q8NDM7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.69□□□□□ -2.3
CFAP43Q8NDM7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CFAP43Q8NDM7 AL589655.1-201ENST00000405398 482 ntBASIC0.69□□□□□ -2.3
CFAP43Q8NDM7 OFD1P18Y-201ENST00000420889 959 ntBASIC0.69□□□□□ -2.3
CFAP43Q8NDM7 TOMM22P2-201ENST00000430735 237 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms