Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AC087883.1-201ENST00000551882 391 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 RPS3AP4-201ENST00000555161 764 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 NRBF2P1-201ENST00000587407 859 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AC104763.2-201ENST00000604179 382 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AC012314.7-201ENST00000619693 93 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AC007998.5-201ENST00000622938 237 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 AC004777.1-201ENST00000624317 287 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 MIR203B-201ENST00000636080 86 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 U2.21-201ENST00000637295 81 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 MIR7515-201ENST00000637837 67 ntBASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC71LQ8N9Z2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC073343.1-201ENST00000328239 651 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 RNU6-960P-201ENST00000364056 120 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 SNORA68.1-201ENST00000364537 132 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 RNU6-169P-201ENST00000365336 107 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 RNU6-641P-201ENST00000384006 107 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 MIR23A-201ENST00000385245 73 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 DEFB108C-201ENST00000400154 252 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AL138885.1-201ENST00000405921 675 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 RPS12P24-201ENST00000412619 387 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 CDK8P2-201ENST00000415020 547 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC114491.1-201ENST00000416095 246 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AL353729.1-201ENST00000425044 720 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 ISCA1P1-201ENST00000426679 387 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AL353706.1-201ENST00000436728 494 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 MTND1P29-201ENST00000448112 647 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 FABP5P13-201ENST00000452144 328 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC093899.1-201ENST00000457984 376 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC079140.3-201ENST00000511111 550 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 IGLV3-17-201ENST00000519099 244 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 OR5BN1P-201ENST00000532955 829 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC012468.1-201ENST00000604888 430 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC107294.1-201ENST00000609524 467 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC104237.2-201ENST00000612456 443 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 DUSP12P1-201ENST00000612874 516 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 AC009509.4-201ENST00000619202 509 ntBASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC71LQ8N9Z2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 SNORA11.1-201ENST00000408133 129 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AL358934.1-201ENST00000432346 324 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 PRSS3P4-201ENST00000453323 162 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 RNU6-953P-201ENST00000459154 107 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 RPL7P49-201ENST00000471402 708 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC004924.1-201ENST00000480160 781 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 MTCO3P28-201ENST00000513351 515 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 SCARNA24.1-201ENST00000516465 137 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 MIR3616-201ENST00000584070 92 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC005261.5-201ENST00000596280 355 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC245014.2-201ENST00000603689 287 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC246785.4-201ENST00000605374 287 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AL158032.1-201ENST00000605401 106 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC245008.1-201ENST00000608123 476 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AL365204.3-201ENST00000612448 685 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 HMGB1P24-202ENST00000615653 685 ntBASIC2.17□□□□□ -2.06
CCDC71LQ8N9Z2 AC072046.2-201ENST00000618366 268 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 1126.3 ms