Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.89□□□□□ -1.95
LDB1Q86U70 MIR6863-201ENST00000636112 90 ntBASIC2.89□□□□□ -1.95
LDB1Q86U70 U6.99-201ENST00000637524 83 ntBASIC2.89□□□□□ -1.95
LDB1Q86U70 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LDB1Q86U70 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
LDB1Q86U70 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LDB1Q86U70 AL161431.1-201ENST00000618966 4205 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
LDB1Q86U70 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AP003122.5-201ENST00000527668 3766 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LDB1Q86U70 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AL645937.1-202ENST00000421799 937 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AL596276.1-201ENST00000434465 418 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 RPS15AP5-201ENST00000436276 388 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AC098831.1-201ENST00000440661 216 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 RPL23AP20-201ENST00000447965 421 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AC104058.1-201ENST00000448028 297 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 RPS3AP14-201ENST00000483907 780 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 RPL9P6-201ENST00000492764 598 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.88□□□□□ -1.95
LDB1Q86U70 RAC1P5-201ENST00000512182 576 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC105417.1-201ENST00000514691 285 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 SCGB1D5P-201ENST00000515134 247 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 RNU6-572P-201ENST00000516724 80 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC007536.1-201ENST00000533382 349 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LDB1Q86U70 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.88□□□□□ -1.95
LDB1Q86U70 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC025281.1-201ENST00000567026 265 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC012507.3-201ENST00000603556 477 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.88□□□□□ -1.95
LDB1Q86U70 AC017083.3-201ENST00000609955 700 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AL359740.1-201ENST00000624340 592 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.88□□□□□ -1.95
LDB1Q86U70 CKAP2P1-201ENST00000555477 2049 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 AL353743.1-202ENST00000431724 1695 ntBASIC2.88□□□□□ -1.95
LDB1Q86U70 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDB1Q86U70 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LDB1Q86U70 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB1Q86U70 SNORA51.4-201ENST00000364993 124 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB1Q86U70 RNU6-116P-201ENST00000384042 109 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 MIR181B1-201ENST00000385240 110 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AL138885.1-201ENST00000405921 675 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 RN7SKP58-201ENST00000411010 305 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AC023141.4-201ENST00000412031 328 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AL451074.5-201ENST00000415894 435 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 RPL35AP12-201ENST00000425362 338 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB1Q86U70 GTF2IP20-201ENST00000431663 360 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB1Q86U70 RPS29P6-201ENST00000438196 145 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB1Q86U70 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB1Q86U70 MTND1P18-201ENST00000448191 573 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB1Q86U70 AL162395.1-201ENST00000457882 422 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 RPS29P12-201ENST00000460178 152 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB1Q86U70 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.87□□□□□ -1.95
LDB1Q86U70 AP002404.1-201ENST00000532005 451 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.87□□□□□ -1.95
LDB1Q86U70 MIR4782-201ENST00000577987 79 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB1Q86U70 MIR4325-201ENST00000583049 90 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 MIR548AC-201ENST00000585049 88 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB1Q86U70 AC008945.2-201ENST00000606056 604 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 AC013562.2-201ENST00000611632 603 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB1Q86U70 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB1Q86U70 AL035425.3-201ENST00000564206 4996 ntBASIC2.87□□□□□ -1.95
LDB1Q86U70 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.86□□□□□ -1.95
LDB1Q86U70 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.86□□□□□ -1.95
LDB1Q86U70 AC099654.7-201ENST00000635788 2127 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LDB1Q86U70 RPL9P7-201ENST00000330965 580 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 Y_RNA.41-201ENST00000362646 102 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 RNU6-550P-201ENST00000391057 101 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 SNORA48.5-201ENST00000391143 135 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 SNORA40C-201ENST00000391285 128 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 UBE2V1P2-201ENST00000397758 440 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AL031779.1-201ENST00000415663 330 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AL353193.1-201ENST00000421444 268 ntBASIC2.86□□□□□ -1.95
LDB1Q86U70 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms