Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC093106.2-201ENST00000428212 385 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AC092573.2-201ENST00000434546 243 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.67□□□□□ -2.3
UBR3Q6ZT12 CYP4A27P-201ENST00000567218 190 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AP001269.3-201ENST00000588718 329 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 AC008945.2-201ENST00000606056 604 ntBASIC0.67□□□□□ -2.3
UBR3Q6ZT12 Y_RNA.62-201ENST00000362840 99 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 SNORA8-201ENST00000384574 139 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 USP9YP33-201ENST00000412220 421 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 TOMM22P2-201ENST00000430735 237 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 USP9YP35-201ENST00000435696 412 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 SNRPEP7-201ENST00000438350 220 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 MTND2P19-201ENST00000449129 1012 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AL096803.2-201ENST00000450032 677 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AC079776.3-201ENST00000450665 370 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.66□□□□□ -2.3
UBR3Q6ZT12 RNU6-1004P-201ENST00000516584 111 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.66□□□□□ -2.3
UBR3Q6ZT12 MIR4422-201ENST00000581938 83 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AC068276.1-201ENST00000605793 379 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AL356585.4-201ENST00000623078 1229 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AC067863.3-201ENST00000624172 122 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AP003399.1-201ENST00000637534 361 ntBASIC0.66□□□□□ -2.3
UBR3Q6ZT12 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.65□□□□□ -2.3
UBR3Q6ZT12 AC099548.1-201ENST00000421443 426 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 GTF2IP20-201ENST00000431663 360 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 AC245047.4-201ENST00000433189 144 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 MTND6P13-201ENST00000443510 523 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 HMGN2P9-201ENST00000476875 229 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 RNU11-2P-201ENST00000516898 142 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 AC092470.1-201ENST00000546187 132 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.65□□□□□ -2.3
UBR3Q6ZT12 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.65□□□□□ -2.3
UBR3Q6ZT12 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.65□□□□□ -2.3
UBR3Q6ZT12 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.65□□□□□ -2.3
UBR3Q6ZT12 RNU6-338P-201ENST00000383888 105 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 Y_RNA.433-201ENST00000384089 102 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 RPL37P10-201ENST00000412884 288 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.65□□□□□ -2.31
UBR3Q6ZT12 PNPLA4P1-201ENST00000458328 305 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 RPL31P60-201ENST00000478450 367 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
UBR3Q6ZT12 RNU6-1282P-201ENST00000516735 96 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 AC008562.1-201ENST00000521763 330 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 OR5B19P-201ENST00000531766 928 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.65□□□□□ -2.31
UBR3Q6ZT12 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.65□□□□□ -2.31
UBR3Q6ZT12 MTCO2P22-201ENST00000603246 681 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 AC068787.1-201ENST00000623908 691 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 AC091925.2-201ENST00000625059 256 ntBASIC0.65□□□□□ -2.31
UBR3Q6ZT12 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.65□□□□□ -2.31
UBR3Q6ZT12 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.64□□□□□ -2.31
UBR3Q6ZT12 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
UBR3Q6ZT12 RNU2-70P-201ENST00000410718 179 ntBASIC0.64□□□□□ -2.31
UBR3Q6ZT12 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.64□□□□□ -2.31
UBR3Q6ZT12 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UBR3Q6ZT12 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
UBR3Q6ZT12 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.64□□□□□ -2.31
UBR3Q6ZT12 MIR892C-201ENST00000516410 77 ntBASIC0.64□□□□□ -2.31
UBR3Q6ZT12 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.64□□□□□ -2.31
UBR3Q6ZT12 MTCYBP27-201ENST00000555160 670 ntBASIC0.64□□□□□ -2.31
UBR3Q6ZT12 HMGB1P14-201ENST00000557424 591 ntBASIC0.64□□□□□ -2.31
UBR3Q6ZT12 AL356421.1-201ENST00000403255 413 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AL354941.1-201ENST00000438600 464 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AC105036.1-201ENST00000566222 271 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AP003973.1-201ENST00000604639 691 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AC087821.2-201ENST00000637086 450 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 RNU6-775P-201ENST00000459318 96 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AC008379.1-201ENST00000463655 464 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR3Q6ZT12 RNU6-798P-201ENST00000516912 103 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.63□□□□□ -2.31
UBR3Q6ZT12 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 U4atac.1-201ENST00000618345 95 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 AP003072.5-201ENST00000623872 773 ntBASIC0.63□□□□□ -2.31
UBR3Q6ZT12 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.62□□□□□ -2.31
UBR3Q6ZT12 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.62□□□□□ -2.31
UBR3Q6ZT12 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
UBR3Q6ZT12 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.62□□□□□ -2.31
UBR3Q6ZT12 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.62□□□□□ -2.31
UBR3Q6ZT12 AC107953.1-201ENST00000522216 297 ntBASIC0.62□□□□□ -2.31
UBR3Q6ZT12 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.62□□□□□ -2.31
UBR3Q6ZT12 HMGN2P15-201ENST00000585707 270 ntBASIC0.62□□□□□ -2.31
UBR3Q6ZT12 CYP2C61P-201ENST00000604072 290 ntBASIC0.62□□□□□ -2.31
UBR3Q6ZT12 AC138473.1-201ENST00000605717 526 ntBASIC0.62□□□□□ -2.31
UBR3Q6ZT12 AP002826.1-201ENST00000608835 315 ntBASIC0.62□□□□□ -2.31
UBR3Q6ZT12 NDUFS5P1-201ENST00000405668 289 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
UBR3Q6ZT12 CST2P1-201ENST00000425770 87 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms