Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 RNU6-989P-201ENST00000362756 107 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 Y_RNA.216-201ENST00000364205 93 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 MIR514A2-201ENST00000385131 88 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 MIR514A3-201ENST00000385132 88 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 SNORA75.4-201ENST00000391278 119 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 UBE2V1P2-201ENST00000397758 440 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 RNA5SP56-201ENST00000410277 118 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 Z99755.1-201ENST00000414048 380 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC104332.2-201ENST00000429959 156 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 RPS20P5-201ENST00000434808 360 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 HMGB1P18-201ENST00000438801 619 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC079781.2-201ENST00000446424 169 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 MTND1P9-201ENST00000453775 944 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 GMFBP1-201ENST00000467831 427 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 MTND5P5-201ENST00000503764 376 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC114797.1-201ENST00000514003 728 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 Y_RNA.665-201ENST00000516177 98 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 Y_RNA.691-201ENST00000516611 103 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC087241.2-201ENST00000535801 324 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 SETP7-201ENST00000552169 453 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AC012182.1-201ENST00000570133 895 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AL669831.4-202ENST00000590817 238 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 RNU6-89P-201ENST00000606519 100 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AL627309.6-201ENST00000606857 840 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AL603758.1-201ENST00000618654 241 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 AL035425.3-201ENST00000564206 4996 ntBASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.3□□□□□ -1.88
CAPRIN2Q6IMN6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 RNU6-263P-201ENST00000363811 107 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 RNU4-48P-201ENST00000365559 182 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 SNORA26.7-201ENST00000391288 122 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 RNU4-14P-201ENST00000410858 122 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AL353729.1-201ENST00000425044 720 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 OR2AS1P-201ENST00000427827 319 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 NDUFA5P4-201ENST00000436704 385 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 HMGB3P11-201ENST00000440127 604 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 RAC1P7-201ENST00000445367 377 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 MTND4P19-201ENST00000446659 478 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AC008264.1-201ENST00000447612 367 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 RPS29P15-201ENST00000458329 171 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 MRPS17P3-201ENST00000465453 385 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AL049714.1-201ENST00000466686 347 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 RN7SKP219-201ENST00000516825 296 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AL442663.2-201ENST00000554385 511 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 EIF4BP1-201ENST00000554881 351 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 PSMA3P-201ENST00000555485 635 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AL118558.2-201ENST00000556294 238 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 MIR4325-201ENST00000583049 90 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AC105224.1-201ENST00000587055 421 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 KC877982.1-201ENST00000602313 470 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AC113139.1-201ENST00000605049 239 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 AL162730.1-201ENST00000605734 292 ntBASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
CAPRIN2Q6IMN6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 Y_RNA.231-201ENST00000364358 102 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 RNU6-522P-201ENST00000364497 107 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 RNU6-38P-201ENST00000384085 107 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 TXNP7-201ENST00000406296 293 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 RPL7P10-201ENST00000417407 739 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 OR1AA1P-201ENST00000419597 916 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 GPM6BP2-201ENST00000432046 144 ntBASIC3.28□□□□□ -1.88
CAPRIN2Q6IMN6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms