Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AL136164.3-201ENST00000624429 3978 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 SNORA62.3-201ENST00000365110 153 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 Y_RNA.358-201ENST00000365491 99 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 Y_RNA.383-201ENST00000383855 97 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RPL21P75-201ENST00000396599 483 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RPL21P28-201ENST00000401418 483 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RPL31P2-201ENST00000413849 377 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 EI24P1-201ENST00000416584 867 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AL590556.1-201ENST00000423231 483 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 HLA-N-201ENST00000437516 135 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 RPL21P11-201ENST00000461458 483 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RPL21P39-201ENST00000463605 483 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC105137.1-201ENST00000484355 562 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC132942.1-201ENST00000486753 483 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RPL30P10-201ENST00000488148 337 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC093591.1-201ENST00000491435 481 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RN7SL810P-201ENST00000493031 276 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RPL21P16-201ENST00000495531 483 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 RNU6-496P-201ENST00000516145 99 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC091144.1-201ENST00000519573 138 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 SNRPGP16-201ENST00000533275 226 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC006130.2-201ENST00000586202 326 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC123786.2-201ENST00000603459 275 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC098826.3-201ENST00000603823 466 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC123912.5-201ENST00000605470 343 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC034102.8-201ENST00000615146 484 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC006133.1-201ENST00000617106 264 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 U6.106-201ENST00000636360 105 ntBASIC4.61□□□□□ -1.67
RNF43Q68DV7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF43Q68DV7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF43Q68DV7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF43Q68DV7 AC107027.3-201ENST00000565095 3473 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 RN7SKP280-201ENST00000364196 304 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 Y_RNA.398-201ENST00000383952 99 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 MIR513A2-201ENST00000385249 127 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 RNU6-817P-201ENST00000391083 104 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 AL079342.1-201ENST00000401460 267 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 SNORA11F-201ENST00000408237 128 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 RNU6-394P-201ENST00000410735 107 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 AC092447.6-201ENST00000414578 210 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 snoU109.4-201ENST00000458953 143 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 RNU6-1037P-201ENST00000459571 107 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 RN7SL98P-201ENST00000462271 300 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 HMGB1P25-201ENST00000468402 607 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 COX6CP14-201ENST00000469580 174 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 SNORD116-28-201ENST00000516123 91 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 IGKV2D-36-201ENST00000518643 226 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF43Q68DV7 AC006077.1-201ENST00000604746 343 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 Y_RNA.772-201ENST00000606692 102 ntBASIC4.6□□□□□ -1.67
RNF43Q68DV7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF43Q68DV7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF43Q68DV7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF43Q68DV7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF43Q68DV7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF43Q68DV7 Y_RNA.44-201ENST00000362676 108 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RNU6-339P-201ENST00000384310 107 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RNU6-937P-201ENST00000384325 106 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 MIR554-201ENST00000384874 96 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RNF43Q68DV7 RN7SKP202-201ENST00000410439 330 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RNA5SP39-201ENST00000411245 120 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RPS15AP40-201ENST00000419621 391 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 AL591043.1-201ENST00000432461 424 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.59□□□□□ -1.67
RNF43Q68DV7 BX679664.1-201ENST00000434429 253 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RPS11P1-201ENST00000451072 473 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 RPL23AP2-201ENST00000471227 466 ntBASIC4.59□□□□□ -1.67
RNF43Q68DV7 UQCRHP4-201ENST00000471686 272 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms