Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 Y_RNA.188-201ENST00000363952 111 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 Y_RNA.512-201ENST00000384518 102 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 RNU6-658P-201ENST00000384606 106 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 SAR1AP2-201ENST00000392696 594 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 U3.37-201ENST00000408528 213 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 OR2AQ1P-201ENST00000451972 200 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 MTATP6P7-201ENST00000453315 681 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 RPL30P10-201ENST00000488148 337 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 RNU1-103P-201ENST00000516502 125 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AC136624.4-201ENST00000573044 370 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 IPO5P1-202ENST00000600039 287 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AC008962.1-201ENST00000605729 304 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AC114781.5-201ENST00000615297 108 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 AC032011.1-201ENST00000611703 1549 ntBASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SNAP47Q5SQN1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC022336.2-201ENST00000568966 2538 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RNU6-778P-201ENST00000363269 103 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RNU1-20P-201ENST00000363314 162 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RNA5SP479-201ENST00000364858 117 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 Y_RNA.526-201ENST00000384572 110 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RPS20P14-201ENST00000412545 360 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RPL26P27-201ENST00000414397 437 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 YPEL5P1-201ENST00000419731 367 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 FTH1P6-201ENST00000430768 320 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RPS29P17-201ENST00000430795 166 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC073910.1-201ENST00000445047 438 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 MTCO3P8-201ENST00000453691 755 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 RN7SL303P-201ENST00000469773 251 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 UBE2CP3-201ENST00000502715 450 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 MTND4LP22-201ENST00000508209 276 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC008958.1-201ENST00000511047 682 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC090281.1-201ENST00000523019 276 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 IGKV2D-19-201ENST00000523346 262 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 MYL12BP1-201ENST00000569826 507 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC107871.2-201ENST00000612894 502 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 MIR6716-201ENST00000613413 80 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AC004825.2-201ENST00000616634 455 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 U2.1-201ENST00000618978 145 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 MFSD8-242ENST00000641690 4199 ntBASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SNAP47Q5SQN1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.72
SNAP47Q5SQN1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SNAP47Q5SQN1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
SNAP47Q5SQN1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 RNU6-1318P-201ENST00000365389 103 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 SNORA63.7-201ENST00000365579 123 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 RNU6-784P-201ENST00000384330 106 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 RNU6-1222P-201ENST00000384615 107 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 SNORA69.1-201ENST00000390904 137 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 RPL21P1-201ENST00000399532 476 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 RNA5SP494-201ENST00000410653 129 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 HMGN2P30-201ENST00000423237 256 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 AC004975.1-201ENST00000428733 208 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 RPS3AP12-201ENST00000443616 753 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 OSTCP8-201ENST00000445117 448 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 NUTF2P3-201ENST00000448540 384 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 AL132838.2-201ENST00000492041 314 ntBASIC4.33□□□□□ -1.72
SNAP47Q5SQN1 RN7SL810P-201ENST00000493031 276 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms