Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU6-741P-201ENST00000383889 107 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 MIR129-1-201ENST00000384972 72 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 RNU6-578P-201ENST00000390980 103 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AL035079.1-201ENST00000405210 287 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 RNA5SP56-201ENST00000410277 118 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AL592148.1-201ENST00000413568 445 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AL732292.1-201ENST00000426692 226 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 RN7SL443P-201ENST00000464331 290 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AC233702.9-201ENST00000581528 203 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AC024153.1-201ENST00000603103 365 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 U7.2-201ENST00000607576 63 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AC015726.2-201ENST00000620112 122 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AC090617.7-201ENST00000623952 126 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 AL360270.2-201ENST00000562952 5985 ntBASIC5.27□□□□□ -1.57
CTC1Q2NKJ3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 Y_RNA.230-201ENST00000364348 109 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 RN7SKP153-201ENST00000365026 316 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 RNU6-381P-201ENST00000391259 108 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AL451062.2-201ENST00000427515 271 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AL589765.3-201ENST00000446084 462 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AC012158.1-204ENST00000483430 465 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 RN7SKP234-201ENST00000517173 224 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AC107294.1-201ENST00000609524 467 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 U73479.1-201ENST00000618062 168 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 MIR6853-201ENST00000619642 74 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 CR381572.2-201ENST00000624852 397 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 MIR3914-2-201ENST00000637339 95 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 AC083843.2-201ENST00000568248 6253 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 MAPK10-263ENST00000641052 4307 ntBASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CTC1Q2NKJ3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 RNU6-294P-201ENST00000364999 102 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 MIR589-201ENST00000385238 99 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AC007738.1-201ENST00000413892 348 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AIMP1P2-201ENST00000425294 312 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AL592045.1-201ENST00000429867 352 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 RPL23AP56-201ENST00000460778 453 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 RN7SL817P-201ENST00000480777 288 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 RN7SL814P-201ENST00000487715 300 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 SNORD116-26-201ENST00000516006 96 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 LARP7P3-201ENST00000579888 337 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 MIR4744-201ENST00000581563 82 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AC005176.2-201ENST00000596933 147 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 BX005214.3-202ENST00000619809 325 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AP001340.1-201ENST00000624405 217 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 MAPK10-349ENST00000641767 3661 ntBASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.25□□□□□ -1.57
CTC1Q2NKJ3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTC1Q2NKJ3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms