Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 RNU1-36P-201ENST00000365130 165 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 RNU6-14P-201ENST00000384630 106 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 MIR597-201ENST00000384968 97 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 RNU6-733P-201ENST00000410759 104 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.52□□□□□ -2.33
HMGN3Q15651 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.52□□□□□ -2.33
HMGN3Q15651 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.52□□□□□ -2.33
HMGN3Q15651 AL049874.1-201ENST00000489560 388 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.52□□□□□ -2.33
HMGN3Q15651 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HMGN3Q15651 AF131216.2-201ENST00000512316 564 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 OR5AK1P-201ENST00000524837 922 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 AC011604.1-201ENST00000545978 196 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 AC093510.2-201ENST00000562820 896 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 AC109446.2-201ENST00000567872 497 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 AC002400.1-201ENST00000569310 726 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 AC084824.5-201ENST00000612009 413 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 MIR5739-201ENST00000619803 80 ntBASIC0.52□□□□□ -2.33
HMGN3Q15651 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.52□□□□□ -2.33
HMGN3Q15651 AC068700.1-201ENST00000565862 3754 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 RNU6-884P-201ENST00000363889 107 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 Y_RNA.338-201ENST00000365320 114 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 RNA5SP240-201ENST00000365355 128 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 TPMTP3-201ENST00000411928 735 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 POLR2J4-204ENST00000418424 324 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN3Q15651 RPL26P6-201ENST00000440913 438 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 RAB11AP1-201ENST00000442978 646 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.51□□□□□ -2.33
HMGN3Q15651 C1DP3-201ENST00000455013 423 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 RPS26P55-201ENST00000471178 356 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AC018868.1-201ENST00000491307 315 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 RNU6-1053P-201ENST00000515930 101 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 DEFB108E-201ENST00000524692 240 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.51□□□□□ -2.33
HMGN3Q15651 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.51□□□□□ -2.33
HMGN3Q15651 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.51□□□□□ -2.33
HMGN3Q15651 AL590095.2-201ENST00000604136 117 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AC004775.1-201ENST00000607389 753 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AC021851.1-201ENST00000608537 1082 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.51□□□□□ -2.33
HMGN3Q15651 AL359854.1-201ENST00000614203 1594 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AC068722.2-201ENST00000618734 544 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 AC018926.3-201ENST00000618841 406 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 U1.36-201ENST00000620684 176 ntBASIC0.51□□□□□ -2.33
HMGN3Q15651 MTND5P35-201ENST00000557537 1720 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 RNU5A-1-201ENST00000362698 116 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 RNU11-3P-201ENST00000391111 133 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 C1DP1-201ENST00000426049 402 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.5□□□□□ -2.33
HMGN3Q15651 AC244505.3-201ENST00000454598 187 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 FCF1P6-201ENST00000456841 595 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 AC113420.1-201ENST00000507903 571 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 RNU5A-7P-201ENST00000515979 116 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 SCARNA16.2-201ENST00000516520 172 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
HMGN3Q15651 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.5□□□□□ -2.33
HMGN3Q15651 AC012414.6-201ENST00000568241 401 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 AL078604.3-201ENST00000615580 211 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 ZNF663P-202ENST00000641770 1131 ntBASIC0.5□□□□□ -2.33
HMGN3Q15651 SNORA4.1-201ENST00000364263 144 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
HMGN3Q15651 AL392003.1-201ENST00000434394 243 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 THAP5P1-201ENST00000439089 262 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 Z82210.1-201ENST00000440037 231 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.49□□□□□ -2.33
HMGN3Q15651 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.49□□□□□ -2.33
HMGN3Q15651 CYP2C59P-201ENST00000457790 269 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 RPS20P20-201ENST00000460498 340 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 RPS27P22-201ENST00000478056 241 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 AP001025.1-201ENST00000486139 332 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 AC145146.1-201ENST00000496370 254 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.49□□□□□ -2.33
HMGN3Q15651 SNORA25.11-201ENST00000515935 105 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.49□□□□□ -2.33
HMGN3Q15651 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.49□□□□□ -2.33
HMGN3Q15651 AC124947.2-202ENST00000552735 133 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 AC073544.2-201ENST00000601155 540 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 AL022067.1-201ENST00000602426 454 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 AL109659.3-201ENST00000624985 950 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 AC083865.1-201ENST00000636634 831 ntBASIC0.49□□□□□ -2.33
HMGN3Q15651 BTF3P8-201ENST00000414577 526 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.48□□□□□ -2.33
HMGN3Q15651 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.48□□□□□ -2.33
HMGN3Q15651 ARL5AP3-201ENST00000439327 386 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AL161651.1-201ENST00000440882 223 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AL161788.1-201ENST00000441805 169 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.48□□□□□ -2.33
HMGN3Q15651 AL353691.1-201ENST00000451332 387 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 DUXAP8-207ENST00000456786 622 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AC114982.1-201ENST00000469402 321 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGN3Q15651 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HMGN3Q15651 AC025459.1-201ENST00000504072 156 ntBASIC0.48□□□□□ -2.33
HMGN3Q15651 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms