Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 GPM6BP3-201ENST00000442797 145 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 RPL23AP42-201ENST00000471152 471 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC022493.1-201ENST00000492984 337 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 RPL38P4-201ENST00000502376 214 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC138853.1-201ENST00000503549 823 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 SUMO2P6-201ENST00000505273 288 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 NDUFB4P2-201ENST00000509515 391 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 MRPS36P2-201ENST00000512569 299 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 RNA5SP182-201ENST00000516064 82 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 RNU6-1003P-201ENST00000517099 105 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 HMGN1P28-201ENST00000521340 364 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 ATP5F1P5-201ENST00000526403 760 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 DEFB108A-201ENST00000530110 222 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 ZNF519P3-201ENST00000557158 1032 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC091489.2-201ENST00000566263 604 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC068790.3-201ENST00000602988 553 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC112187.2-201ENST00000604345 283 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 APOOP1-201ENST00000604695 592 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 MTND4LP5-201ENST00000605152 292 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 FTX_3.1-201ENST00000610451 147 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AL449363.1-201ENST00000617815 186 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 AC131159.1-201ENST00000621854 213 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 MTND4P35-201ENST00000604257 1375 ntBASIC2.17□□□□□ -2.06
SMARCB1Q12824 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMARCB1Q12824 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMARCB1Q12824 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 RNU6-14P-201ENST00000384630 106 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SMARCB1Q12824 USP9YP13-201ENST00000417797 480 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 RPS27AP14-201ENST00000422868 454 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 ZNF863P-201ENST00000426746 417 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC007560.1-201ENST00000426912 237 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 SRIP2-201ENST00000428470 166 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC244035.1-201ENST00000430042 390 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 USP12PX-201ENST00000432383 1057 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC118469.1-201ENST00000442943 488 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC116347.2-201ENST00000514912 523 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 SNORA3.4-201ENST00000515969 96 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC025755.1-201ENST00000521306 278 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC107934.1-201ENST00000522215 217 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 LRRC34P1-201ENST00000542742 915 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC002400.1-201ENST00000569310 726 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AL161729.4-201ENST00000604650 476 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC105129.3-201ENST00000605455 485 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 OR10AB1P-201ENST00000609613 938 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 AC004223.4-201ENST00000612426 332 ntBASIC2.16□□□□□ -2.06
SMARCB1Q12824 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SMARCB1Q12824 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SMARCB1Q12824 CKAP2P1-201ENST00000555477 2049 ntBASIC2.15□□□□□ -2.06
SMARCB1Q12824 AL445523.1-201ENST00000451184 1362 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 RNU2-2P-201ENST00000410396 191 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC023141.4-201ENST00000412031 328 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 BTF3L4P3-201ENST00000418879 476 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 SKA2P1-201ENST00000425592 390 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 AL365184.2-201ENST00000431139 435 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 PSPHP1-201ENST00000450062 261 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 ZNF114P1-201ENST00000453500 292 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 RNU7-125P-201ENST00000458760 62 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC107626.1-201ENST00000471084 183 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 MTND5P13-201ENST00000513046 1079 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC114797.1-201ENST00000514003 728 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 RNU6-927P-201ENST00000516199 100 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 RNU6-759P-201ENST00000516740 103 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 RN7SKP258-201ENST00000517151 304 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 DEFB122-202ENST00000569013 197 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 MIR5002-201ENST00000584713 97 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.15□□□□□ -2.07
SMARCB1Q12824 MTCYBP22-201ENST00000603788 447 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AP000860.1-201ENST00000605250 559 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AC018638.7-201ENST00000605836 1114 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 AL355816.2-201ENST00000610049 647 ntBASIC2.15□□□□□ -2.07
SMARCB1Q12824 U2.15-201ENST00000611544 191 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms