Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 DEFB108D-201ENST00000527787 222 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.31□□□□□ -2.04
CKAP4Q07065 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.31□□□□□ -2.04
CKAP4Q07065 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.31□□□□□ -2.04
CKAP4Q07065 AP003465.2-201ENST00000602571 373 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 DEFB131E-202ENST00000602581 683 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AL022154.1-201ENST00000604698 785 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AP002826.1-201ENST00000608835 315 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AL450472.3-201ENST00000615578 367 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC068792.1-201ENST00000621354 417 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CKAP4Q07065 AL137790.1-201ENST00000634283 177 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.31□□□□□ -2.04
CKAP4Q07065 AC110994.2-201ENST00000635481 492 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 AC099654.12-201ENST00000639868 649 ntBASIC2.31□□□□□ -2.04
CKAP4Q07065 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CKAP4Q07065 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CKAP4Q07065 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.31□□□□□ -2.04
CKAP4Q07065 AL359693.1-201ENST00000614959 2407 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.3□□□□□ -2.04
CKAP4Q07065 RNU6-223P-201ENST00000362830 107 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 Y_RNA.516-201ENST00000384541 124 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 RNA5SP354-201ENST00000391247 136 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 RNU6-195P-201ENST00000411352 109 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 ELOCP17-201ENST00000414751 326 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.3□□□□□ -2.04
CKAP4Q07065 BX295541.1-201ENST00000417774 250 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.3□□□□□ -2.04
CKAP4Q07065 PPP1R11P2-201ENST00000423543 382 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 MTCO3P30-201ENST00000426425 670 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.3□□□□□ -2.04
CKAP4Q07065 SRIP2-201ENST00000428470 166 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.3□□□□□ -2.04
CKAP4Q07065 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.3□□□□□ -2.04
CKAP4Q07065 MTND1P1-201ENST00000445453 368 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.3□□□□□ -2.04
CKAP4Q07065 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.3□□□□□ -2.04
CKAP4Q07065 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.3□□□□□ -2.04
CKAP4Q07065 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.3□□□□□ -2.04
CKAP4Q07065 AC108078.1-201ENST00000508073 725 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.3□□□□□ -2.04
CKAP4Q07065 Vault.3-201ENST00000516676 95 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 RNA5SP337-201ENST00000517007 109 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.3□□□□□ -2.04
CKAP4Q07065 AC025755.1-201ENST00000521306 278 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 DEFB108A-201ENST00000530110 222 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 HMGB1P14-201ENST00000557424 591 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.3□□□□□ -2.04
CKAP4Q07065 AL391840.1-201ENST00000571144 367 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 MIR3167-201ENST00000579623 85 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 SNORD53-201ENST00000579969 78 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 MIR4444-1-201ENST00000581696 74 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 MIR4444-2-201ENST00000584390 74 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
CKAP4Q07065 AC245014.2-201ENST00000603689 287 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC246785.4-201ENST00000605374 287 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC046143.2-201ENST00000609789 160 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC103710.2-201ENST00000609912 942 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC090970.3-201ENST00000612566 866 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.3□□□□□ -2.04
CKAP4Q07065 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 AC019226.1-201ENST00000625666 515 ntBASIC2.3□□□□□ -2.04
CKAP4Q07065 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.3□□□□□ -2.04
CKAP4Q07065 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CKAP4Q07065 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
CKAP4Q07065 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
CKAP4Q07065 AC009812.4-201ENST00000569134 1805 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.29□□□□□ -2.04
CKAP4Q07065 Y_RNA.6-201ENST00000362350 114 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 RNU6-461P-201ENST00000364195 107 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 RNU6-1103P-201ENST00000384150 107 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 RNU6-432P-201ENST00000384196 109 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 RPS3AP36-201ENST00000398190 775 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL109755.1-201ENST00000401791 649 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 RPS3AP24-201ENST00000407896 734 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.29□□□□□ -2.04
CKAP4Q07065 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.29□□□□□ -2.04
CKAP4Q07065 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.29□□□□□ -2.04
CKAP4Q07065 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.29□□□□□ -2.04
CKAP4Q07065 MTND3P21-201ENST00000433774 331 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.29□□□□□ -2.04
CKAP4Q07065 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.29□□□□□ -2.04
CKAP4Q07065 AC005094.1-201ENST00000440420 368 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.29□□□□□ -2.04
CKAP4Q07065 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.29□□□□□ -2.04
CKAP4Q07065 AL136380.1-201ENST00000447970 162 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.29□□□□□ -2.04
CKAP4Q07065 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.29□□□□□ -2.04
CKAP4Q07065 RPL31P41-201ENST00000477967 372 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AC107401.1-201ENST00000503426 685 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.29□□□□□ -2.04
CKAP4Q07065 SNORA31.22-201ENST00000517204 135 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 MTND1P5-201ENST00000517906 940 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.29□□□□□ -2.04
CKAP4Q07065 MIR4293-201ENST00000584305 78 ntBASIC2.29□□□□□ -2.04
CKAP4Q07065 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms