Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.93□□□□□ -2.26
HIST1H1AQ02539 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 CBX3P1-201ENST00000325243 554 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 RNU5E-8P-201ENST00000363502 116 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 RNU4-51P-201ENST00000364206 140 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 SNORA40.6-201ENST00000391153 128 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 RPL22P22-201ENST00000395439 379 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 TOMM20P4-201ENST00000427861 435 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 MTND2P5-201ENST00000432656 1006 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 CR769776.1-201ENST00000441254 787 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 RPL23AP76-201ENST00000441860 458 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 snoU13.9-201ENST00000458927 103 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 RNA5SP135-201ENST00000517019 125 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 PSMA3P-201ENST00000555485 635 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC023824.3-201ENST00000569003 562 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 LARP7P2-201ENST00000575306 125 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 CYP2C61P-201ENST00000604072 290 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC107075.1-201ENST00000613695 314 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC004009.2-201ENST00000623016 728 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 AC017037.3-201ENST00000625016 472 ntBASIC0.92□□□□□ -2.26
HIST1H1AQ02539 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HIST1H1AQ02539 SNORD115-3-201ENST00000363100 82 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 RNU1-23P-201ENST00000363361 144 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 SNORA22-201ENST00000383907 134 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 SNORA22C-201ENST00000384614 134 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 RNU11-3P-201ENST00000391111 133 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 OR51A5P-201ENST00000415429 942 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 RPS29P28-201ENST00000446439 141 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC002381.1-201ENST00000447049 280 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 SNORD97-201ENST00000459187 142 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 RPL36AP21-201ENST00000490372 323 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 RNU6-528P-201ENST00000516926 100 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 CYCSP27-201ENST00000527643 293 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AL355598.1-201ENST00000604169 202 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC004805.2-201ENST00000605382 482 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC025754.2-201ENST00000606491 432 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AL157834.3-201ENST00000615543 103 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AL353997.5-201ENST00000618886 171 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AC079416.3-201ENST00000624479 549 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 AP000560.1-201ENST00000624150 1937 ntBASIC0.91□□□□□ -2.26
HIST1H1AQ02539 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.91□□□□□ -2.26
HIST1H1AQ02539 RNU6-582P-201ENST00000362989 107 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 SNORA7.1-201ENST00000363750 139 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 SNORA62.1-201ENST00000364287 154 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 RNU4-91P-201ENST00000364778 135 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 SNORA17.3-201ENST00000391159 129 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 RNU4-62P-201ENST00000410125 130 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL451054.2-201ENST00000420896 202 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL691517.1-201ENST00000440833 1235 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 snoU13.23-201ENST00000458863 104 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL121594.1-201ENST00000475906 575 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.9□□□□□ -2.27
HIST1H1AQ02539 MTCYBP16-201ENST00000509187 1129 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AC025465.3-201ENST00000510570 311 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AC093677.1-201ENST00000514414 678 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 RNA5SP290-201ENST00000517133 127 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 RNU6-667P-201ENST00000517186 102 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL121821.2-201ENST00000556081 394 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL355802.3-201ENST00000607571 545 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AL121890.5-201ENST00000620848 304 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AC091965.5-201ENST00000624785 342 ntBASIC0.9□□□□□ -2.27
HIST1H1AQ02539 AC007435.1-201ENST00000421086 415 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AL591704.2-201ENST00000421658 181 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AC002542.1-201ENST00000440683 193 ntBASIC0.89□□□□□ -2.27
HIST1H1AQ02539 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms