Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL359314.1-201ENST00000616913 261 ntBASIC1.62□□□□□ -2.15
TPM4P67936 AC017037.3-201ENST00000625016 472 ntBASIC1.62□□□□□ -2.15
TPM4P67936 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.62□□□□□ -2.15
TPM4P67936 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TPM4P67936 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
TPM4P67936 RNU6-354P-201ENST00000383862 107 ntBASIC1.61□□□□□ -2.15
TPM4P67936 RNU6-610P-201ENST00000384264 107 ntBASIC1.61□□□□□ -2.15
TPM4P67936 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
TPM4P67936 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AL021407.1-201ENST00000404531 386 ntBASIC1.61□□□□□ -2.15
TPM4P67936 RNU2-42P-201ENST00000410697 113 ntBASIC1.61□□□□□ -2.15
TPM4P67936 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.61□□□□□ -2.15
TPM4P67936 GTF2IP3-201ENST00000433887 494 ntBASIC1.61□□□□□ -2.15
TPM4P67936 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.61□□□□□ -2.15
TPM4P67936 RPS15AP9-201ENST00000439856 381 ntBASIC1.61□□□□□ -2.15
TPM4P67936 MTATP6P30-201ENST00000443540 664 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.61□□□□□ -2.15
TPM4P67936 AC079776.3-201ENST00000450665 370 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.61□□□□□ -2.15
TPM4P67936 OR6C5P-201ENST00000452388 923 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.61□□□□□ -2.15
TPM4P67936 RNU6-583P-201ENST00000516012 92 ntBASIC1.61□□□□□ -2.15
TPM4P67936 OR5B19P-201ENST00000531766 928 ntBASIC1.61□□□□□ -2.15
TPM4P67936 OR6C7P-201ENST00000547875 934 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AC079148.1-201ENST00000565944 819 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AL356432.3-201ENST00000568952 465 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.61□□□□□ -2.15
TPM4P67936 ELOCP5-201ENST00000604924 333 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AC016925.2-201ENST00000605108 242 ntBASIC1.61□□□□□ -2.15
TPM4P67936 NDUFA8P1-201ENST00000605525 367 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AC018638.7-201ENST00000605836 1114 ntBASIC1.61□□□□□ -2.15
TPM4P67936 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.61□□□□□ -2.15
TPM4P67936 AC099063.3-201ENST00000642066 185 ntBASIC1.61□□□□□ -2.15
TPM4P67936 AP000776.1-201ENST00000530032 1663 ntBASIC1.61□□□□□ -2.15
TPM4P67936 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.61□□□□□ -2.15
TPM4P67936 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.6□□□□□ -2.15
TPM4P67936 SNORA67.6-201ENST00000391093 99 ntBASIC1.6□□□□□ -2.15
TPM4P67936 CISD1P1-201ENST00000393907 327 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AC244035.1-201ENST00000430042 390 ntBASIC1.6□□□□□ -2.15
TPM4P67936 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AC008481.1-201ENST00000463278 396 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AC006512.1-201ENST00000468816 291 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AC021146.2-201ENST00000504736 556 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.6□□□□□ -2.15
TPM4P67936 RNU6-390P-201ENST00000516259 103 ntBASIC1.6□□□□□ -2.15
TPM4P67936 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.6□□□□□ -2.15
TPM4P67936 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AL731537.2-201ENST00000561565 951 ntBASIC1.6□□□□□ -2.15
TPM4P67936 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.6□□□□□ -2.15
TPM4P67936 MTATP6P25-201ENST00000574491 261 ntBASIC1.6□□□□□ -2.15
TPM4P67936 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.6□□□□□ -2.15
TPM4P67936 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.6□□□□□ -2.15
TPM4P67936 AC091304.6-201ENST00000619761 202 ntBASIC1.6□□□□□ -2.15
TPM4P67936 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.6□□□□□ -2.15
TPM4P67936 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.6□□□□□ -2.15
TPM4P67936 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.6□□□□□ -2.15
TPM4P67936 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.6□□□□□ -2.15
TPM4P67936 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
TPM4P67936 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TPM4P67936 WWP1P1-201ENST00000466609 2769 ntBASIC1.59□□□□□ -2.15
TPM4P67936 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
TPM4P67936 RNU5E-1-201ENST00000362477 120 ntBASIC1.59□□□□□ -2.15
TPM4P67936 RNU6-338P-201ENST00000383888 105 ntBASIC1.59□□□□□ -2.15
TPM4P67936 RNU6-1122P-201ENST00000384449 107 ntBASIC1.59□□□□□ -2.15
TPM4P67936 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TPM4P67936 U8.13-201ENST00000390842 128 ntBASIC1.59□□□□□ -2.15
TPM4P67936 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.59□□□□□ -2.15
TPM4P67936 AC009310.1-201ENST00000414414 451 ntBASIC1.59□□□□□ -2.15
TPM4P67936 AL358453.1-201ENST00000422522 250 ntBASIC1.59□□□□□ -2.15
TPM4P67936 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
TPM4P67936 AC092634.2-201ENST00000428146 1010 ntBASIC1.59□□□□□ -2.15
TPM4P67936 MTCYBP35-201ENST00000503630 1137 ntBASIC1.59□□□□□ -2.15
TPM4P67936 AC098799.1-201ENST00000504752 800 ntBASIC1.59□□□□□ -2.15
TPM4P67936 ACA59.2-201ENST00000517061 156 ntBASIC1.59□□□□□ -2.15
TPM4P67936 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.59□□□□□ -2.15
TPM4P67936 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.59□□□□□ -2.15
TPM4P67936 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.59□□□□□ -2.15
TPM4P67936 AL160236.1-201ENST00000556317 195 ntBASIC1.59□□□□□ -2.15
TPM4P67936 AC021646.1-201ENST00000605469 484 ntBASIC1.59□□□□□ -2.15
TPM4P67936 MIR6845-201ENST00000613182 61 ntBASIC1.59□□□□□ -2.15
TPM4P67936 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.59□□□□□ -2.15
TPM4P67936 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TPM4P67936 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TPM4P67936 RNU6-207P-201ENST00000384137 107 ntBASIC1.58□□□□□ -2.16
TPM4P67936 RNU1-57P-201ENST00000384491 166 ntBASIC1.58□□□□□ -2.16
TPM4P67936 MIR29C-201ENST00000385231 88 ntBASIC1.58□□□□□ -2.16
TPM4P67936 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
TPM4P67936 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM4P67936 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM4P67936 UBE2V1P4-201ENST00000425374 344 ntBASIC1.58□□□□□ -2.16
TPM4P67936 HMGN2P3-201ENST00000433603 273 ntBASIC1.58□□□□□ -2.16
TPM4P67936 HMGN2P5-201ENST00000436882 273 ntBASIC1.58□□□□□ -2.16
TPM4P67936 HMGB1P18-201ENST00000438801 619 ntBASIC1.58□□□□□ -2.16
TPM4P67936 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.58□□□□□ -2.16
TPM4P67936 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM4P67936 HSPE1P24-201ENST00000450782 238 ntBASIC1.58□□□□□ -2.16
TPM4P67936 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.58□□□□□ -2.16
TPM4P67936 FCF1P6-201ENST00000456841 595 ntBASIC1.58□□□□□ -2.16
TPM4P67936 UBL5P3-201ENST00000475112 231 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms