Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SNRPGP18-201ENST00000553000 214 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 MTCO3P23-201ENST00000561363 289 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
HERVK_113P62684 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.18□□□□□ -1.74
HERVK_113P62684 AC008737.2-201ENST00000599446 118 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERVK_113P62684 AL669831.3-213ENST00000636676 183 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.18□□□□□ -1.74
HERVK_113P62684 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
HERVK_113P62684 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERVK_113P62684 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HERVK_113P62684 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERVK_113P62684 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.18□□□□□ -1.74
HERVK_113P62684 AC006504.1-201ENST00000562493 3666 ntBASIC4.18□□□□□ -1.74
HERVK_113P62684 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.18□□□□□ -1.74
HERVK_113P62684 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HERVK_113P62684 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
HERVK_113P62684 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HERVK_113P62684 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HERVK_113P62684 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
HERVK_113P62684 RNA5SP502-201ENST00000362694 119 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 RNU6-1303P-201ENST00000364841 107 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AL133412.1-201ENST00000380194 2992 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 RNU6-310P-201ENST00000384655 107 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 RPL23AP48-201ENST00000406913 488 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.17□□□□□ -1.74
HERVK_113P62684 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.17□□□□□ -1.74
HERVK_113P62684 AC244098.2-201ENST00000422068 99 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AC005300.1-201ENST00000428401 373 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.17□□□□□ -1.74
HERVK_113P62684 ELOCP24-201ENST00000456370 334 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 RPL21P41-201ENST00000459863 264 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AC108860.1-201ENST00000484521 383 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AC009901.1-201ENST00000506703 541 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AC079140.5-201ENST00000507882 310 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 RNU6-1016P-201ENST00000516689 94 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 RNU6-914P-201ENST00000516749 109 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 RNU1-54P-201ENST00000517181 120 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 IGKV2D-23-201ENST00000518179 286 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.17□□□□□ -1.74
HERVK_113P62684 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.17□□□□□ -1.74
HERVK_113P62684 AC002044.1-201ENST00000606707 158 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 PISRT1.1-201ENST00000616930 107 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 uc_338.22-201ENST00000622722 187 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 AC244205.2-202ENST00000635781 342 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
HERVK_113P62684 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HERVK_113P62684 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HERVK_113P62684 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HERVK_113P62684 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.17□□□□□ -1.74
HERVK_113P62684 PNPT1P2-201ENST00000456768 2050 ntBASIC4.17□□□□□ -1.74
HERVK_113P62684 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HERVK_113P62684 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HERVK_113P62684 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERVK_113P62684 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERVK_113P62684 KPNA2P1-201ENST00000458289 1591 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
HERVK_113P62684 RNU4-35P-201ENST00000362588 141 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERVK_113P62684 RNU6-639P-201ENST00000384074 107 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 Y_RNA.459-201ENST00000384251 102 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERVK_113P62684 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 Y_RNA.646-201ENST00000410980 101 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 RPL7P37-201ENST00000425095 738 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 AC008264.1-201ENST00000447612 367 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 AP000873.1-201ENST00000463987 400 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 RN7SL807P-201ENST00000470923 297 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 RPS29P2-201ENST00000479278 136 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 AC025518.1-201ENST00000479856 347 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 SMURF2P1-201ENST00000514992 481 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 RNU2-27P-201ENST00000516185 142 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 RNU6-988P-201ENST00000519081 107 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.16□□□□□ -1.74
HERVK_113P62684 AC026371.1-201ENST00000551867 419 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.16□□□□□ -1.74
HERVK_113P62684 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.16□□□□□ -1.74
HERVK_113P62684 MIR5692A1-201ENST00000580523 69 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 AC002545.1-201ENST00000592511 181 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.16□□□□□ -1.74
HERVK_113P62684 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.16□□□□□ -1.74
HERVK_113P62684 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.16□□□□□ -1.74
HERVK_113P62684 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HERVK_113P62684 AC004925.1-201ENST00000624256 2706 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HERVK_113P62684 OR4G2P-202ENST00000641004 1759 ntBASIC4.16□□□□□ -1.74
HERVK_113P62684 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HERVK_113P62684 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.16□□□□□ -1.74
HERVK_113P62684 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
HERVK_113P62684 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
HERVK_113P62684 AC138393.1-203ENST00000327086 343 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 RNU6-593P-201ENST00000364716 112 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 Y_RNA.473-201ENST00000384333 102 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.15□□□□□ -1.75
HERVK_113P62684 PMCHL1-202ENST00000423102 261 ntBASIC4.15□□□□□ -1.75
HERVK_113P62684 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.15□□□□□ -1.75
HERVK_113P62684 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.15□□□□□ -1.75
HERVK_113P62684 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.15□□□□□ -1.75
HERVK_113P62684 AC010285.1-201ENST00000470580 392 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms