Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AMD1P1-201ENST00000457220 922 ntBASIC1.36□□□□□ -2.19
LSM6P62312 AC008379.1-201ENST00000463655 464 ntBASIC1.36□□□□□ -2.19
LSM6P62312 AC021382.1-201ENST00000483523 359 ntBASIC1.36□□□□□ -2.19
LSM6P62312 FAM92A1P2-202ENST00000504766 877 ntBASIC1.36□□□□□ -2.19
LSM6P62312 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM6P62312 SNORA25.11-201ENST00000515935 105 ntBASIC1.36□□□□□ -2.19
LSM6P62312 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.36□□□□□ -2.19
LSM6P62312 AC027807.1-201ENST00000559921 996 ntBASIC1.36□□□□□ -2.19
LSM6P62312 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM6P62312 AL713866.2-201ENST00000603579 219 ntBASIC1.36□□□□□ -2.19
LSM6P62312 AC116312.1-201ENST00000606841 314 ntBASIC1.36□□□□□ -2.19
LSM6P62312 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM6P62312 AL445264.1-201ENST00000621719 171 ntBASIC1.36□□□□□ -2.19
LSM6P62312 AC138627.2-201ENST00000624202 601 ntBASIC1.36□□□□□ -2.19
LSM6P62312 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM6P62312 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM6P62312 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.36□□□□□ -2.19
LSM6P62312 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LSM6P62312 AC138393.1-203ENST00000327086 343 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AC068050.1-201ENST00000394891 380 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AL021407.1-201ENST00000404531 386 ntBASIC1.35□□□□□ -2.19
LSM6P62312 UBE2V1P15-201ENST00000407776 448 ntBASIC1.35□□□□□ -2.19
LSM6P62312 MIR1289-2-201ENST00000408360 111 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM6P62312 AC007098.1-201ENST00000420122 367 ntBASIC1.35□□□□□ -2.19
LSM6P62312 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LSM6P62312 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM6P62312 RPL36AP53-201ENST00000432891 316 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.35□□□□□ -2.19
LSM6P62312 HSPE1P24-201ENST00000450782 238 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AC006512.1-201ENST00000468816 291 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AC023790.1-201ENST00000482174 347 ntBASIC1.35□□□□□ -2.19
LSM6P62312 SNORA48.9-201ENST00000516419 162 ntBASIC1.35□□□□□ -2.19
LSM6P62312 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM6P62312 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM6P62312 ELOCP5-201ENST00000604924 333 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AC016925.2-201ENST00000605108 242 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AL359314.1-201ENST00000616913 261 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AL118508.4-201ENST00000624142 1176 ntBASIC1.35□□□□□ -2.19
LSM6P62312 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LSM6P62312 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.35□□□□□ -2.19
LSM6P62312 AL161722.3-201ENST00000605789 2983 ntBASIC1.35□□□□□ -2.19
LSM6P62312 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LSM6P62312 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
LSM6P62312 RNU1-57P-201ENST00000384491 166 ntBASIC1.34□□□□□ -2.19
LSM6P62312 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LSM6P62312 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
LSM6P62312 CYCSP49-201ENST00000420810 319 ntBASIC1.34□□□□□ -2.19
LSM6P62312 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM6P62312 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM6P62312 AL121890.1-201ENST00000435457 205 ntBASIC1.34□□□□□ -2.19
LSM6P62312 MTCO3P45-201ENST00000443036 613 ntBASIC1.34□□□□□ -2.19
LSM6P62312 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
LSM6P62312 AC020550.1-201ENST00000447385 163 ntBASIC1.34□□□□□ -2.19
LSM6P62312 FCF1P6-201ENST00000456841 595 ntBASIC1.34□□□□□ -2.19
LSM6P62312 AC112771.1-201ENST00000463581 102 ntBASIC1.34□□□□□ -2.19
LSM6P62312 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM6P62312 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.34□□□□□ -2.19
LSM6P62312 TPT1P8-201ENST00000510120 555 ntBASIC1.34□□□□□ -2.19
LSM6P62312 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM6P62312 RNU6-362P-201ENST00000516736 90 ntBASIC1.34□□□□□ -2.19
LSM6P62312 IMMP1LP2-201ENST00000552954 492 ntBASIC1.34□□□□□ -2.19
LSM6P62312 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM6P62312 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.34□□□□□ -2.19
LSM6P62312 AL356432.3-201ENST00000568952 465 ntBASIC1.34□□□□□ -2.19
LSM6P62312 AL354943.1-201ENST00000572103 781 ntBASIC1.34□□□□□ -2.19
LSM6P62312 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
LSM6P62312 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.34□□□□□ -2.19
LSM6P62312 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.34□□□□□ -2.19
LSM6P62312 AC025811.1-201ENST00000604312 472 ntBASIC1.34□□□□□ -2.19
LSM6P62312 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.34□□□□□ -2.19
LSM6P62312 CDR1-202ENST00000625883 1485 ntBASIC1.34□□□□□ -2.19
LSM6P62312 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
LSM6P62312 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.33□□□□□ -2.2
LSM6P62312 RNA5SP190-201ENST00000365222 118 ntBASIC1.33□□□□□ -2.2
LSM6P62312 RNU6-338P-201ENST00000383888 105 ntBASIC1.33□□□□□ -2.2
LSM6P62312 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
LSM6P62312 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
LSM6P62312 USP9YP26-201ENST00000421008 661 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AC010095.1-201ENST00000443543 144 ntBASIC1.33□□□□□ -2.2
LSM6P62312 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
LSM6P62312 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.33□□□□□ -2.2
LSM6P62312 AC092001.1-201ENST00000453012 261 ntBASIC1.33□□□□□ -2.2
LSM6P62312 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LSM6P62312 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.33□□□□□ -2.2
LSM6P62312 Y_RNA.675-201ENST00000516389 149 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AP003497.1-201ENST00000528472 562 ntBASIC1.33□□□□□ -2.2
LSM6P62312 OR5B19P-201ENST00000531766 928 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AC023825.1-201ENST00000566704 1030 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
LSM6P62312 AL353997.4-201ENST00000586196 166 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AC073544.2-201ENST00000601155 540 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AL161798.1-201ENST00000604630 131 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AC091304.6-201ENST00000619761 202 ntBASIC1.33□□□□□ -2.2
LSM6P62312 AP005901.5-201ENST00000545779 1796 ntBASIC1.33□□□□□ -2.2
LSM6P62312 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
LSM6P62312 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.32□□□□□ -2.2
LSM6P62312 RNU6-1207P-201ENST00000384343 107 ntBASIC1.32□□□□□ -2.2
LSM6P62312 RNU6-114P-201ENST00000384704 105 ntBASIC1.32□□□□□ -2.2
LSM6P62312 AL591034.2-201ENST00000402839 359 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms