Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MIR4330-201ENST00000579077 105 ntBASIC4.75□□□□□ -1.65
EPHA4P54764 MIR4282-201ENST00000583613 67 ntBASIC4.75□□□□□ -1.65
EPHA4P54764 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.75□□□□□ -1.65
EPHA4P54764 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EPHA4P54764 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
EPHA4P54764 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
EPHA4P54764 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
EPHA4P54764 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
EPHA4P54764 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHA4P54764 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHA4P54764 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHA4P54764 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
EPHA4P54764 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.74□□□□□ -1.65
EPHA4P54764 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
EPHA4P54764 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHA4P54764 UBE2WP1-201ENST00000362030 340 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 RNU6-626P-201ENST00000363354 107 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 RNU6-898P-201ENST00000365627 104 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 SNORD116-20-201ENST00000384529 92 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 Y_RNA.570-201ENST00000384750 101 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 PPIAP31-201ENST00000405422 495 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 RPL26P27-201ENST00000414397 437 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.74□□□□□ -1.65
EPHA4P54764 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.74□□□□□ -1.65
EPHA4P54764 RPL23AP56-201ENST00000460778 453 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 AC091959.1-201ENST00000495857 238 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 AC093840.1-201ENST00000511599 336 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 RNU1-103P-201ENST00000516502 125 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 AP005660.1-201ENST00000522972 293 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.74□□□□□ -1.65
EPHA4P54764 AC008749.1-201ENST00000597650 306 ntBASIC4.74□□□□□ -1.65
EPHA4P54764 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.74□□□□□ -1.65
EPHA4P54764 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHA4P54764 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.74□□□□□ -1.65
EPHA4P54764 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
EPHA4P54764 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
EPHA4P54764 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.74□□□□□ -1.65
EPHA4P54764 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHA4P54764 AL672167.1-204ENST00000641875 3017 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
EPHA4P54764 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHA4P54764 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 RNU6-704P-201ENST00000364162 103 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 SNORA7.2-201ENST00000364446 145 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 Y_RNA.240-201ENST00000364469 95 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 RNU6-20P-201ENST00000384106 107 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 MIR10B-201ENST00000385011 110 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 RNA5SP213-201ENST00000391031 106 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.73□□□□□ -1.65
EPHA4P54764 AC092047.1-201ENST00000424997 240 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 WARS2P1-201ENST00000429678 537 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 AL512844.2-201ENST00000433990 593 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHA4P54764 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.73□□□□□ -1.65
EPHA4P54764 AL031659.1-201ENST00000447075 539 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.73□□□□□ -1.65
EPHA4P54764 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.73□□□□□ -1.65
EPHA4P54764 RPL21P104-201ENST00000464143 478 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 IGLV2-34-201ENST00000490007 283 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 SNORA27.4-201ENST00000516650 95 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 RNU6-567P-201ENST00000516746 107 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 AC025884.1-201ENST00000556034 378 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 AC019159.1-201ENST00000605094 187 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 AC073349.3-201ENST00000617616 186 ntBASIC4.73□□□□□ -1.65
EPHA4P54764 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
EPHA4P54764 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
EPHA4P54764 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
EPHA4P54764 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
EPHA4P54764 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
EPHA4P54764 AP000542.2-201ENST00000623199 6179 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AL136964.1-201ENST00000622038 2990 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
EPHA4P54764 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
EPHA4P54764 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
EPHA4P54764 AC079741.1-201ENST00000321498 212 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 RNU6-1175P-201ENST00000365200 107 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 SNORD50.2-201ENST00000365465 70 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 MIR325-201ENST00000385260 98 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 RNU6-1197P-201ENST00000391183 107 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 MIR298-201ENST00000401212 88 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 TBCAP2-201ENST00000416175 326 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.72□□□□□ -1.65
EPHA4P54764 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.72□□□□□ -1.65
EPHA4P54764 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.72□□□□□ -1.65
EPHA4P54764 GPM6BP3-201ENST00000442797 145 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AC073264.2-201ENST00000448886 166 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 RN7SL517P-201ENST00000462240 305 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 RPL23AP14-201ENST00000468281 468 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 RPL26P26-201ENST00000480251 434 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AP001025.1-201ENST00000486139 332 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AC016632.1-201ENST00000503994 196 ntBASIC4.72□□□□□ -1.65
EPHA4P54764 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms