Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AK6P1-201ENST00000540219 478 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AC006199.1-201ENST00000548728 219 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AC037471.2-201ENST00000564941 598 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AC007151.1-201ENST00000572774 483 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AC090517.2-201ENST00000614966 680 ntBASIC3.55□□□□□ -1.84
NEK3P51956 AL355365.1-201ENST00000616480 294 ntBASIC3.55□□□□□ -1.84
NEK3P51956 YWHAEP7-203ENST00000622054 312 ntBASIC3.55□□□□□ -1.84
NEK3P51956 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
NEK3P51956 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
NEK3P51956 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
NEK3P51956 AC093536.2-201ENST00000565257 1406 ntBASIC3.54□□□□□ -1.84
NEK3P51956 RNU1-75P-201ENST00000347264 129 ntBASIC3.54□□□□□ -1.84
NEK3P51956 RNU6-82P-201ENST00000363970 107 ntBASIC3.54□□□□□ -1.84
NEK3P51956 Y_RNA.381-201ENST00000365666 102 ntBASIC3.54□□□□□ -1.84
NEK3P51956 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 Y_RNA.450-201ENST00000384198 113 ntBASIC3.54□□□□□ -1.84
NEK3P51956 SNORD37.1-201ENST00000390968 65 ntBASIC3.54□□□□□ -1.84
NEK3P51956 SNORD70.1-201ENST00000391007 85 ntBASIC3.54□□□□□ -1.84
NEK3P51956 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.54□□□□□ -1.84
NEK3P51956 RAP1BP3-201ENST00000407180 549 ntBASIC3.54□□□□□ -1.84
NEK3P51956 Y_RNA.599-201ENST00000410489 109 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 UBE2V1P8-201ENST00000437166 265 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
NEK3P51956 WASF1P1-201ENST00000447560 1131 ntBASIC3.54□□□□□ -1.84
NEK3P51956 RPS15AP27-201ENST00000449183 343 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.54□□□□□ -1.84
NEK3P51956 RN7SL594P-201ENST00000470590 287 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 RPL38P4-201ENST00000502376 214 ntBASIC3.54□□□□□ -1.84
NEK3P51956 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.54□□□□□ -1.84
NEK3P51956 RAC1P5-201ENST00000512182 576 ntBASIC3.54□□□□□ -1.84
NEK3P51956 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.54□□□□□ -1.84
NEK3P51956 AC007458.1-201ENST00000542812 373 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 AC146944.4-201ENST00000602697 718 ntBASIC3.54□□□□□ -1.84
NEK3P51956 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AL355877.2-201ENST00000603670 358 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AC004492.1-201ENST00000607036 742 ntBASIC3.54□□□□□ -1.84
NEK3P51956 Z82243.1-201ENST00000609432 473 ntBASIC3.54□□□□□ -1.84
NEK3P51956 DISC2.1-201ENST00000612827 205 ntBASIC3.54□□□□□ -1.84
NEK3P51956 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.54□□□□□ -1.84
NEK3P51956 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.54□□□□□ -1.84
NEK3P51956 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.54□□□□□ -1.84
NEK3P51956 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.54□□□□□ -1.84
NEK3P51956 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NEK3P51956 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NEK3P51956 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
NEK3P51956 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEK3P51956 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.53□□□□□ -1.84
NEK3P51956 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
NEK3P51956 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.53□□□□□ -1.84
NEK3P51956 AC010889.1-201ENST00000566193 2666 ntBASIC3.53□□□□□ -1.84
NEK3P51956 RNU4-35P-201ENST00000362588 141 ntBASIC3.53□□□□□ -1.84
NEK3P51956 MIR490-201ENST00000384865 128 ntBASIC3.53□□□□□ -1.84
NEK3P51956 MIR518D-201ENST00000385014 87 ntBASIC3.53□□□□□ -1.84
NEK3P51956 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.53□□□□□ -1.84
NEK3P51956 RNU6-908P-201ENST00000410160 94 ntBASIC3.53□□□□□ -1.84
NEK3P51956 Y_RNA.619-201ENST00000410951 90 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AL592148.1-201ENST00000413568 445 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC017079.2-201ENST00000416102 485 ntBASIC3.53□□□□□ -1.84
NEK3P51956 ATG3P1-201ENST00000419507 911 ntBASIC3.53□□□□□ -1.84
NEK3P51956 SNRPEP10-201ENST00000420249 274 ntBASIC3.53□□□□□ -1.84
NEK3P51956 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.53□□□□□ -1.84
NEK3P51956 MTCO1P20-201ENST00000425366 358 ntBASIC3.53□□□□□ -1.84
NEK3P51956 TRIAP1P1-201ENST00000427062 225 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK3P51956 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK3P51956 MTND1P4-201ENST00000435196 415 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.53□□□□□ -1.84
NEK3P51956 CALM1P1-201ENST00000442082 433 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC006026.2-201ENST00000457376 180 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC025518.1-201ENST00000479856 347 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC074250.1-201ENST00000511117 192 ntBASIC3.53□□□□□ -1.84
NEK3P51956 RNA5SP401-201ENST00000515920 127 ntBASIC3.53□□□□□ -1.84
NEK3P51956 RNU2-69P-201ENST00000516061 100 ntBASIC3.53□□□□□ -1.84
NEK3P51956 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.53□□□□□ -1.84
NEK3P51956 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NEK3P51956 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NEK3P51956 AL138976.2-201ENST00000563989 694 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC092325.1-201ENST00000566449 554 ntBASIC3.53□□□□□ -1.84
NEK3P51956 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK3P51956 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK3P51956 AC073539.2-201ENST00000597113 165 ntBASIC3.53□□□□□ -1.84
NEK3P51956 U2.17-201ENST00000611454 95 ntBASIC3.53□□□□□ -1.84
NEK3P51956 U6atac.1-201ENST00000616025 117 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC010338.1-201ENST00000621823 717 ntBASIC3.53□□□□□ -1.84
NEK3P51956 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.53□□□□□ -1.84
NEK3P51956 SCARNA4-202ENST00000625402 129 ntBASIC3.53□□□□□ -1.84
NEK3P51956 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.53□□□□□ -1.84
NEK3P51956 MIR7153-201ENST00000637758 57 ntBASIC3.53□□□□□ -1.84
NEK3P51956 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
NEK3P51956 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NEK3P51956 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
NEK3P51956 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
NEK3P51956 AC004944.1-201ENST00000517807 3059 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms