Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCN3P51790 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 RNU6-677P-201ENST00000516914 101 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AL121579.1-201ENST00000555129 305 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 MIR3609-201ENST00000582661 80 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AC008752.3-201ENST00000588113 712 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCN3P51790 AC060780.3-201ENST00000589464 80 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 BNIP3P30-201ENST00000601184 574 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 AP001486.3-201ENST00000615334 372 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 PLCE1P1-201ENST00000622094 305 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 FER-210ENST00000628534 558 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCN3P51790 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.2□□□□□ -1.9
CLCN3P51790 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCN3P51790 AC091152.2-201ENST00000591628 2569 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLCN3P51790 AL359693.1-201ENST00000614959 2407 ntBASIC3.2□□□□□ -1.9
CLCN3P51790 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCN3P51790 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RNU6-451P-201ENST00000362921 107 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RNY3P3-201ENST00000363816 102 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 Y_RNA.295-201ENST00000364918 102 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RNU6-641P-201ENST00000384006 107 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RNU6-217P-201ENST00000384164 104 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RNU6-456P-201ENST00000384493 107 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RNU6-851P-201ENST00000384565 107 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLCN3P51790 RNU6-387P-201ENST00000411331 105 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCN3P51790 SNRPEP10-201ENST00000420249 274 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RPL21P40-201ENST00000428586 483 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RPL23AP30-201ENST00000432419 501 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCN3P51790 AC105272.1-201ENST00000438604 198 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RPS24P13-201ENST00000442520 397 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCN3P51790 NIPA2P5-201ENST00000452282 464 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC012181.1-201ENST00000479895 423 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RPL39P36-201ENST00000490784 156 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC079382.1-201ENST00000493346 557 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC116562.3-201ENST00000506136 177 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC068587.5-201ENST00000528506 175 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 OR5BN1P-201ENST00000532955 829 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCN3P51790 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCN3P51790 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCN3P51790 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCN3P51790 AC107016.2-201ENST00000547968 190 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCN3P51790 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.19□□□□□ -1.9
CLCN3P51790 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.19□□□□□ -1.9
CLCN3P51790 AC024153.1-201ENST00000603103 365 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC098826.3-201ENST00000603823 466 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AL020991.1-201ENST00000612314 373 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CLCN3P51790 AC025253.1-201ENST00000613623 543 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 XIST_intron.1-201ENST00000619444 68 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
CLCN3P51790 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CLCN3P51790 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.19□□□□□ -1.9
CLCN3P51790 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CLCN3P51790 ZNF680P1-201ENST00000436625 1469 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCN3P51790 Y_RNA.38-201ENST00000362617 102 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 Y_RNA.245-201ENST00000364493 95 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 RNU6-1035P-201ENST00000384477 107 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 SNORA46-201ENST00000384762 135 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 Y_RNA.573-201ENST00000384763 105 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AL645937.1-202ENST00000421799 937 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AC012498.1-201ENST00000424037 437 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AC007919.1-201ENST00000429380 217 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 KC877373.1-201ENST00000479066 408 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AC006445.2-201ENST00000510061 472 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 SNORA31.1-201ENST00000515993 133 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 SNORA31.5-201ENST00000516190 133 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 RNU6-1281P-201ENST00000516223 105 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.18□□□□□ -1.9
CLCN3P51790 AP001646.1-201ENST00000527936 915 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCN3P51790 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCN3P51790 AC079600.2-201ENST00000550076 130 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCN3P51790 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.18□□□□□ -1.9
CLCN3P51790 AC024619.4-201ENST00000580924 316 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AL162413.1-201ENST00000603198 110 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AC136601.2-201ENST00000604356 474 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 AL161798.1-201ENST00000604630 131 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 HSPE1P7-201ENST00000604681 321 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 LARP7P1-201ENST00000605576 316 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.18□□□□□ -1.9
CLCN3P51790 AC096644.4-201ENST00000563417 2912 ntBASIC3.18□□□□□ -1.9
CLCN3P51790 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLCN3P51790 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CLCN3P51790 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLCN3P51790 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLCN3P51790 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CLCN3P51790 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms