Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RPS11P1-201ENST00000451072 473 ntBASIC3.66□□□□□ -1.82
CLK3P49761 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
CLK3P49761 RN7SL132P-201ENST00000478131 296 ntBASIC3.66□□□□□ -1.82
CLK3P49761 RN7SL432P-201ENST00000484057 298 ntBASIC3.66□□□□□ -1.82
CLK3P49761 VN1R104P-201ENST00000505115 1009 ntBASIC3.66□□□□□ -1.82
CLK3P49761 SNORA14.1-201ENST00000516113 141 ntBASIC3.66□□□□□ -1.82
CLK3P49761 RNU6-388P-201ENST00000517012 105 ntBASIC3.66□□□□□ -1.82
CLK3P49761 RNU6-389P-201ENST00000517048 105 ntBASIC3.66□□□□□ -1.82
CLK3P49761 SNORD116.3-201ENST00000517176 78 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
CLK3P49761 AC100870.1-201ENST00000522035 505 ntBASIC3.66□□□□□ -1.82
CLK3P49761 OR5D17P-201ENST00000531492 978 ntBASIC3.66□□□□□ -1.82
CLK3P49761 SNRPGP16-201ENST00000533275 226 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AC007224.1-201ENST00000564410 144 ntBASIC3.66□□□□□ -1.82
CLK3P49761 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.66□□□□□ -1.82
CLK3P49761 AL670379.6-201ENST00000603753 252 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AC008162.1-201ENST00000604718 254 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AL670379.1-201ENST00000604752 252 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AL670379.5-201ENST00000605253 252 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AL670379.8-201ENST00000605353 252 ntBASIC3.66□□□□□ -1.82
CLK3P49761 ATP1B3P1-201ENST00000605365 821 ntBASIC3.66□□□□□ -1.82
CLK3P49761 BRDTP1-201ENST00000605735 677 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AL670379.7-201ENST00000605823 252 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AC062037.2-201ENST00000610137 73 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AC107871.2-201ENST00000612894 502 ntBASIC3.66□□□□□ -1.82
CLK3P49761 ZYXP1-201ENST00000617638 118 ntBASIC3.66□□□□□ -1.82
CLK3P49761 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLK3P49761 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.66□□□□□ -1.82
CLK3P49761 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.66□□□□□ -1.82
CLK3P49761 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLK3P49761 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.66□□□□□ -1.82
CLK3P49761 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLK3P49761 AC006504.1-201ENST00000562493 3666 ntBASIC3.66□□□□□ -1.82
CLK3P49761 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLK3P49761 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLK3P49761 CDC27P3-201ENST00000635418 1910 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AL137003.2-201ENST00000606924 2538 ntBASIC3.66□□□□□ -1.82
CLK3P49761 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLK3P49761 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
CLK3P49761 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLK3P49761 USP8P1-201ENST00000494673 3183 ntBASIC3.65□□□□□ -1.82
CLK3P49761 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CLK3P49761 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CLK3P49761 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CLK3P49761 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLK3P49761 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLK3P49761 Y_RNA.389-201ENST00000383924 113 ntBASIC3.65□□□□□ -1.83
CLK3P49761 Y_RNA.428-201ENST00000384078 102 ntBASIC3.65□□□□□ -1.83
CLK3P49761 Y_RNA.489-201ENST00000384410 101 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RNU6-1026P-201ENST00000384465 108 ntBASIC3.65□□□□□ -1.83
CLK3P49761 SNORD70.1-201ENST00000391007 85 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AL445189.1-201ENST00000405722 338 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RNA5SP317-201ENST00000410176 116 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RN7SKP159-201ENST00000410657 292 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RNA5SP311-201ENST00000411290 116 ntBASIC3.65□□□□□ -1.83
CLK3P49761 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLK3P49761 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.65□□□□□ -1.83
CLK3P49761 AL669831.1-202ENST00000428504 417 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AC236972.1-201ENST00000433225 199 ntBASIC3.65□□□□□ -1.83
CLK3P49761 HMGB1P37-201ENST00000439613 609 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.65□□□□□ -1.83
CLK3P49761 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.65□□□□□ -1.83
CLK3P49761 RNU7-167P-201ENST00000459160 62 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AC103987.1-201ENST00000473394 348 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AC104564.1-201ENST00000493028 407 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RBBP4P6-201ENST00000508098 202 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AC107222.1-201ENST00000510899 637 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.65□□□□□ -1.83
CLK3P49761 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.65□□□□□ -1.83
CLK3P49761 RNU6-475P-201ENST00000516073 104 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RNA5SP315-201ENST00000516340 116 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RNA5SP312-201ENST00000517068 116 ntBASIC3.65□□□□□ -1.83
CLK3P49761 RNA5SP179-201ENST00000517284 121 ntBASIC3.65□□□□□ -1.83
CLK3P49761 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.65□□□□□ -1.83
CLK3P49761 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.65□□□□□ -1.83
CLK3P49761 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.65□□□□□ -1.83
CLK3P49761 AC120057.2-201ENST00000571520 271 ntBASIC3.65□□□□□ -1.83
CLK3P49761 AL138889.2-201ENST00000603883 242 ntBASIC3.65□□□□□ -1.83
CLK3P49761 MIR6867-201ENST00000610636 67 ntBASIC3.65□□□□□ -1.83
CLK3P49761 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.65□□□□□ -1.83
CLK3P49761 MIR4275-201ENST00000636486 87 ntBASIC3.65□□□□□ -1.83
CLK3P49761 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLK3P49761 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLK3P49761 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLK3P49761 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLK3P49761 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLK3P49761 Y_RNA.307-201ENST00000365022 117 ntBASIC3.64□□□□□ -1.83
CLK3P49761 SNORA16.2-201ENST00000390991 127 ntBASIC3.64□□□□□ -1.83
CLK3P49761 PTMAP5-201ENST00000393073 333 ntBASIC3.64□□□□□ -1.83
CLK3P49761 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLK3P49761 RNU2-3P-201ENST00000410144 191 ntBASIC3.64□□□□□ -1.83
CLK3P49761 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLK3P49761 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.64□□□□□ -1.83
CLK3P49761 AC093106.2-201ENST00000428212 385 ntBASIC3.64□□□□□ -1.83
CLK3P49761 VDAC1P3-201ENST00000434069 851 ntBASIC3.64□□□□□ -1.83
CLK3P49761 HIGD1AP11-201ENST00000438361 280 ntBASIC3.64□□□□□ -1.83
CLK3P49761 AC083863.1-201ENST00000438811 231 ntBASIC3.64□□□□□ -1.83
CLK3P49761 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.64□□□□□ -1.83
CLK3P49761 SUMO1P2-201ENST00000452524 304 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms