Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC244035.1-201ENST00000430042 390 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL12P48061 GTF2IP20-201ENST00000431663 360 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 XKRYP2-201ENST00000432915 492 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL12P48061 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.95□□□□□ -2.1
CXCL12P48061 MTCO1P42-201ENST00000457379 726 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC092798.1-201ENST00000458542 409 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 MTND2P14-201ENST00000482139 351 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 RPS29P20-201ENST00000489592 171 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL12P48061 MTND5P13-201ENST00000513046 1079 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC117532.1-201ENST00000514638 323 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.95□□□□□ -2.1
CXCL12P48061 AC093012.1-202ENST00000549403 582 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CXCL12P48061 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL12P48061 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.95□□□□□ -2.1
CXCL12P48061 AC010546.1-201ENST00000569391 485 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 MIR3683-201ENST00000580847 82 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.95□□□□□ -2.1
CXCL12P48061 MIR4760-201ENST00000585040 80 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.6-201ENST00000603753 252 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.11-201ENST00000604059 253 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.10-201ENST00000604330 253 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC008162.1-201ENST00000604718 254 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.1-201ENST00000604752 252 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.2-201ENST00000604983 252 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.5-201ENST00000605253 252 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.4-201ENST00000605279 254 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.12-201ENST00000605291 253 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.8-201ENST00000605353 252 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.9-201ENST00000605428 253 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AL670379.7-201ENST00000605823 252 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 UCA1.1-201ENST00000620952 75 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.95□□□□□ -2.1
CXCL12P48061 AC092192.1-201ENST00000633154 1018 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 AC007671.2-201ENST00000637344 619 ntBASIC1.95□□□□□ -2.1
CXCL12P48061 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
CXCL12P48061 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.94□□□□□ -2.1
CXCL12P48061 AC008669.1-201ENST00000565823 2178 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 Y_RNA.46-201ENST00000362695 102 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 RNU6-884P-201ENST00000363889 107 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL12P48061 U8.14-201ENST00000390843 143 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 HIGD1AP15-201ENST00000416198 280 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL12P48061 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL12P48061 AC011233.1-201ENST00000422812 283 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL12P48061 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL12P48061 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL12P48061 GDI2P2-201ENST00000445131 608 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.94□□□□□ -2.1
CXCL12P48061 SNORD13-201ENST00000459299 104 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 MRPS17P3-201ENST00000465453 385 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 AL160314.1-201ENST00000490836 438 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 RNU6-927P-201ENST00000516199 100 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 RNA5SP290-201ENST00000517133 127 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 COX6CP5-201ENST00000527162 228 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 DEFB108A-201ENST00000530110 222 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL12P48061 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.94□□□□□ -2.1
CXCL12P48061 AC078814.3-201ENST00000553036 491 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL12P48061 ISCA1P3-201ENST00000577104 373 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.94□□□□□ -2.1
CXCL12P48061 AC022022.2-201ENST00000602989 360 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 OR10AB1P-201ENST00000609613 938 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 AP000240.1-201ENST00000609910 452 ntBASIC1.94□□□□□ -2.1
CXCL12P48061 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CXCL12P48061 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CXCL12P48061 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.94□□□□□ -2.1
CXCL12P48061 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CXCL12P48061 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CXCL12P48061 RNU1-105P-201ENST00000363470 161 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 RNU5A-8P-201ENST00000364102 114 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 MIR767-201ENST00000390228 109 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 RNU6-278P-201ENST00000390945 109 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 RNA5SP181-201ENST00000410246 98 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 RNU6-321P-201ENST00000410912 106 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.93□□□□□ -2.1
CXCL12P48061 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.93□□□□□ -2.1
CXCL12P48061 CECR9-201ENST00000453421 199 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.93□□□□□ -2.1
CXCL12P48061 AC087588.1-201ENST00000462203 316 ntBASIC1.93□□□□□ -2.1
CXCL12P48061 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CXCL12P48061 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
CXCL12P48061 AC114797.1-201ENST00000514003 728 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms