Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC099548.1-201ENST00000421443 426 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.59□□□□□ -1.99
BRCC3P46736 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.59□□□□□ -1.99
BRCC3P46736 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.59□□□□□ -1.99
BRCC3P46736 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.59□□□□□ -1.99
BRCC3P46736 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.59□□□□□ -1.99
BRCC3P46736 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.59□□□□□ -1.99
BRCC3P46736 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 MTND1P12-201ENST00000455231 147 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 snoU109.1-201ENST00000459339 135 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
BRCC3P46736 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.59□□□□□ -1.99
BRCC3P46736 AP006587.4-201ENST00000526053 529 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 AC093012.1-202ENST00000549403 582 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 AC007938.3-201ENST00000604965 623 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 AC103710.1-201ENST00000610003 901 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
BRCC3P46736 AC108479.2-201ENST00000617314 601 ntBASIC2.59□□□□□ -1.99
BRCC3P46736 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
BRCC3P46736 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -2
BRCC3P46736 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
BRCC3P46736 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
BRCC3P46736 RNU6-188P-201ENST00000364207 107 ntBASIC2.58□□□□□ -2
BRCC3P46736 RNU5E-6P-201ENST00000365574 115 ntBASIC2.58□□□□□ -2
BRCC3P46736 RNU6-701P-201ENST00000384059 107 ntBASIC2.58□□□□□ -2
BRCC3P46736 RN7SKP284-201ENST00000411002 343 ntBASIC2.58□□□□□ -2
BRCC3P46736 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC127391.1-201ENST00000411737 98 ntBASIC2.58□□□□□ -2
BRCC3P46736 ZNF90P2-204ENST00000419323 1075 ntBASIC2.58□□□□□ -2
BRCC3P46736 RPL31P35-201ENST00000431058 377 ntBASIC2.58□□□□□ -2
BRCC3P46736 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.58□□□□□ -2
BRCC3P46736 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.58□□□□□ -2
BRCC3P46736 HIGD1AP2-201ENST00000446367 280 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.58□□□□□ -2
BRCC3P46736 AC079448.1-201ENST00000449377 373 ntBASIC2.58□□□□□ -2
BRCC3P46736 SNRPFP4-201ENST00000456366 242 ntBASIC2.58□□□□□ -2
BRCC3P46736 KLF3P2-201ENST00000465138 268 ntBASIC2.58□□□□□ -2
BRCC3P46736 AP000852.1-201ENST00000472460 573 ntBASIC2.58□□□□□ -2
BRCC3P46736 RBM43P1-201ENST00000476891 1081 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.58□□□□□ -2
BRCC3P46736 AL160314.1-201ENST00000490836 438 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC105252.1-201ENST00000503089 286 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC026436.1-201ENST00000510537 270 ntBASIC2.58□□□□□ -2
BRCC3P46736 RN7SKP258-201ENST00000517151 304 ntBASIC2.58□□□□□ -2
BRCC3P46736 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
BRCC3P46736 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.58□□□□□ -2
BRCC3P46736 AC024909.2-201ENST00000553035 286 ntBASIC2.58□□□□□ -2
BRCC3P46736 AGGF1P4-201ENST00000568249 801 ntBASIC2.58□□□□□ -2
BRCC3P46736 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
BRCC3P46736 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
BRCC3P46736 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC002545.1-201ENST00000592511 181 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC103810.6-201ENST00000606708 136 ntBASIC2.58□□□□□ -2
BRCC3P46736 FTX_3.1-201ENST00000610451 147 ntBASIC2.58□□□□□ -2
BRCC3P46736 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
BRCC3P46736 AL133173.2-201ENST00000614270 90 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC073308.1-201ENST00000623696 305 ntBASIC2.58□□□□□ -2
BRCC3P46736 AC068880.5-201ENST00000624331 290 ntBASIC2.58□□□□□ -2
BRCC3P46736 PISRT1-201ENST00000626175 531 ntBASIC2.58□□□□□ -2
BRCC3P46736 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.58□□□□□ -2
BRCC3P46736 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
BRCC3P46736 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
BRCC3P46736 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.58□□□□□ -2
BRCC3P46736 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.58□□□□□ -2
BRCC3P46736 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
BRCC3P46736 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
BRCC3P46736 ZNF658B-202ENST00000615961 3375 ntBASIC2.57□□□□□ -2
BRCC3P46736 RNU6-1180P-201ENST00000364935 107 ntBASIC2.57□□□□□ -2
BRCC3P46736 RNU6-282P-201ENST00000365357 103 ntBASIC2.57□□□□□ -2
BRCC3P46736 SNORA70B-201ENST00000384210 135 ntBASIC2.57□□□□□ -2
BRCC3P46736 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.57□□□□□ -2
BRCC3P46736 MRPL42P2-201ENST00000403169 426 ntBASIC2.57□□□□□ -2
BRCC3P46736 AL162578.1-201ENST00000406202 378 ntBASIC2.57□□□□□ -2
BRCC3P46736 MIR1261-201ENST00000408659 82 ntBASIC2.57□□□□□ -2
BRCC3P46736 C1DP2-201ENST00000418167 426 ntBASIC2.57□□□□□ -2
BRCC3P46736 ZNF863P-201ENST00000426746 417 ntBASIC2.57□□□□□ -2
BRCC3P46736 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.57□□□□□ -2
BRCC3P46736 AL358934.1-201ENST00000432346 324 ntBASIC2.57□□□□□ -2
BRCC3P46736 USP9YP15-201ENST00000442391 422 ntBASIC2.57□□□□□ -2
BRCC3P46736 TPTE2P5-203ENST00000458118 728 ntBASIC2.57□□□□□ -2
BRCC3P46736 AC138853.1-201ENST00000503549 823 ntBASIC2.57□□□□□ -2
BRCC3P46736 AC009901.1-201ENST00000506703 541 ntBASIC2.57□□□□□ -2
BRCC3P46736 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.57□□□□□ -2
BRCC3P46736 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.57□□□□□ -2
BRCC3P46736 SNORA31.3-201ENST00000516029 96 ntBASIC2.57□□□□□ -2
BRCC3P46736 SCARNA24.1-201ENST00000516465 137 ntBASIC2.57□□□□□ -2
BRCC3P46736 AP002770.2-201ENST00000543613 532 ntBASIC2.57□□□□□ -2
BRCC3P46736 MTCYBP33-201ENST00000575007 1130 ntBASIC2.57□□□□□ -2
BRCC3P46736 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.57□□□□□ -2
BRCC3P46736 AC087241.4-201ENST00000612441 480 ntBASIC2.57□□□□□ -2
BRCC3P46736 Z99129.1-201ENST00000612510 255 ntBASIC2.57□□□□□ -2
BRCC3P46736 AL589743.7-201ENST00000612637 233 ntBASIC2.57□□□□□ -2
BRCC3P46736 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.57□□□□□ -2
BRCC3P46736 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.57□□□□□ -2
BRCC3P46736 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
BRCC3P46736 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
BRCC3P46736 Y_RNA.22-201ENST00000362492 102 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms