Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-1P43699 ZNF519P1-201ENST00000449011 1626 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-1P43699 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-1P43699 AC008264.2-201ENST00000610193 3731 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 Y_RNA.33-201ENST00000362591 102 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 RNA5SP197-201ENST00000363357 119 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 SNORA51.4-201ENST00000364993 124 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 SNORA4.3-201ENST00000365564 137 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-1P43699 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
NKX2-1P43699 RNU6-1068P-201ENST00000410958 103 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 RN7SKP58-201ENST00000411010 305 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 EEF1A1P40-201ENST00000412883 573 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 BMS1P22-201ENST00000414726 313 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-1P43699 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.68□□□□□ -1.98
NKX2-1P43699 MTATP6P23-201ENST00000440153 476 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 MTCO2P3-201ENST00000442543 421 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AL162395.1-201ENST00000457882 422 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 RN7SL75P-201ENST00000461926 281 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AP000852.1-201ENST00000472460 573 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 RPS27AP10-201ENST00000496103 208 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC009901.1-201ENST00000506703 541 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.68□□□□□ -1.98
NKX2-1P43699 RNU4-29P-201ENST00000515943 174 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC007991.1-201ENST00000522680 631 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC134698.4-201ENST00000523451 826 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 AC025281.1-201ENST00000567026 265 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC007938.3-201ENST00000604965 623 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-1P43699 RMST_3.1-201ENST00000611651 109 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-1P43699 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
NKX2-1P43699 AL731566.2-201ENST00000618971 317 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 AC010338.1-201ENST00000621823 717 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NKX2-1P43699 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-1P43699 MTND4P35-201ENST00000604257 1375 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.68□□□□□ -1.98
NKX2-1P43699 AP003122.5-201ENST00000527668 3766 ntBASIC2.68□□□□□ -1.98
NKX2-1P43699 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AC093831.2-201ENST00000624393 3427 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
NKX2-1P43699 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NKX2-1P43699 MTND5P19-201ENST00000424872 1794 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NKX2-1P43699 RNA5SP51-201ENST00000364750 119 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 RNU6-1127P-201ENST00000384580 107 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 RNA5SP354-201ENST00000391247 136 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 RN7SKP111-201ENST00000410349 271 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 OR9R1P-201ENST00000412200 877 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AC138393.2-201ENST00000414742 246 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AC096649.2-201ENST00000416186 393 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AL353729.1-201ENST00000425044 720 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.67□□□□□ -1.98
NKX2-1P43699 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.67□□□□□ -1.98
NKX2-1P43699 HMGB1P31-201ENST00000437242 427 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 NOTCH2P1-201ENST00000443481 624 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 VN1R34P-201ENST00000447387 883 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 MTND3P16-201ENST00000452205 344 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AC069439.1-201ENST00000494739 167 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NKX2-1P43699 AC002456.2-201ENST00000509356 380 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.67□□□□□ -1.98
NKX2-1P43699 RN7SKP18-201ENST00000516005 275 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AC009902.1-201ENST00000519351 183 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 MTND4P7-201ENST00000523876 130 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.67□□□□□ -1.98
NKX2-1P43699 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.67□□□□□ -1.98
NKX2-1P43699 HMGN2P15-201ENST00000585707 270 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 AC005498.1-201ENST00000592125 465 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 AL158032.1-201ENST00000605401 106 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 RNU6-89P-201ENST00000606519 100 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.67□□□□□ -1.98
NKX2-1P43699 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.67□□□□□ -1.98
NKX2-1P43699 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
NKX2-1P43699 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.66□□□□□ -1.98
NKX2-1P43699 AL353743.1-202ENST00000431724 1695 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 AC108206.1-201ENST00000570186 4159 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 HSPA8P4-201ENST00000511877 1920 ntBASIC2.66□□□□□ -1.98
NKX2-1P43699 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NKX2-1P43699 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.66□□□□□ -1.98
NKX2-1P43699 Y_RNA.231-201ENST00000364358 102 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms