Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
RFC3P40938 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RFC3P40938 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.91□□□□□ -2.1
RFC3P40938 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RFC3P40938 RNA5SP88-201ENST00000365560 109 ntBASIC1.91□□□□□ -2.1
RFC3P40938 RNU6-14P-201ENST00000384630 106 ntBASIC1.91□□□□□ -2.1
RFC3P40938 RNU6-748P-201ENST00000384648 107 ntBASIC1.91□□□□□ -2.1
RFC3P40938 HMGB1P11-201ENST00000413899 637 ntBASIC1.91□□□□□ -2.1
RFC3P40938 VPS26BP1-201ENST00000417155 755 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC093106.2-201ENST00000428212 385 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.91□□□□□ -2.1
RFC3P40938 AL591806.2-201ENST00000433122 173 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.91□□□□□ -2.1
RFC3P40938 UBE2FP3-201ENST00000436366 524 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.91□□□□□ -2.1
RFC3P40938 GPM6BP3-201ENST00000442797 145 ntBASIC1.91□□□□□ -2.1
RFC3P40938 PTENP1-201ENST00000447117 1215 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC3P40938 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC3P40938 RPL22P13-201ENST00000493291 347 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.91□□□□□ -2.1
RFC3P40938 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RFC3P40938 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.91□□□□□ -2.1
RFC3P40938 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.91□□□□□ -2.1
RFC3P40938 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC3P40938 CBX3P7-201ENST00000532876 502 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.91□□□□□ -2.1
RFC3P40938 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RFC3P40938 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.91□□□□□ -2.1
RFC3P40938 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.91□□□□□ -2.1
RFC3P40938 MTCYBP22-201ENST00000603788 447 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AL157392.4-201ENST00000609756 345 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AL355472.4-201ENST00000610233 626 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AL161423.1-201ENST00000613700 262 ntBASIC1.91□□□□□ -2.1
RFC3P40938 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFC3P40938 AL109620.1-201ENST00000618738 1197 ntBASIC1.91□□□□□ -2.1
RFC3P40938 AC091965.5-201ENST00000624785 342 ntBASIC1.91□□□□□ -2.1
RFC3P40938 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
RFC3P40938 RNU6-433P-201ENST00000363216 104 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.9□□□□□ -2.11
RFC3P40938 RNU6-636P-201ENST00000384598 107 ntBASIC1.9□□□□□ -2.11
RFC3P40938 RNU6-1242P-201ENST00000391052 103 ntBASIC1.9□□□□□ -2.11
RFC3P40938 ELOCP9-201ENST00000418624 239 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.9□□□□□ -2.11
RFC3P40938 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC3P40938 AC092648.1-201ENST00000425870 423 ntBASIC1.9□□□□□ -2.11
RFC3P40938 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RFC3P40938 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC3P40938 AL118520.1-201ENST00000450770 291 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC092001.1-201ENST00000453012 261 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.9□□□□□ -2.11
RFC3P40938 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.9□□□□□ -2.11
RFC3P40938 RNU6-581P-201ENST00000516214 105 ntBASIC1.9□□□□□ -2.11
RFC3P40938 RNU7-193P-201ENST00000516723 65 ntBASIC1.9□□□□□ -2.11
RFC3P40938 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.9□□□□□ -2.11
RFC3P40938 AP004247.1-201ENST00000531556 1289 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.9□□□□□ -2.11
RFC3P40938 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.9□□□□□ -2.11
RFC3P40938 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.9□□□□□ -2.11
RFC3P40938 AL358072.1-201ENST00000604156 575 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AL158042.1-201ENST00000605338 460 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AL121917.1-203ENST00000605534 577 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC025754.2-201ENST00000606491 432 ntBASIC1.9□□□□□ -2.11
RFC3P40938 RNU4-5P-201ENST00000607255 135 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC103710.2-201ENST00000609912 942 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC090970.3-201ENST00000612566 866 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.9□□□□□ -2.11
RFC3P40938 MIR6134-201ENST00000617606 109 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RFC3P40938 AL356266.1-201ENST00000623311 483 ntBASIC1.9□□□□□ -2.11
RFC3P40938 AC241585.2-209ENST00000638217 143 ntBASIC1.9□□□□□ -2.11
RFC3P40938 CDC27P3-201ENST00000635418 1910 ntBASIC1.89□□□□□ -2.11
RFC3P40938 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
RFC3P40938 AL356292.1-201ENST00000283110 373 ntBASIC1.89□□□□□ -2.11
RFC3P40938 RNU6-701P-201ENST00000384059 107 ntBASIC1.89□□□□□ -2.11
RFC3P40938 RNU6-817P-201ENST00000391083 104 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AL030996.1-201ENST00000411430 235 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.89□□□□□ -2.11
RFC3P40938 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
RFC3P40938 RPS24P7-201ENST00000416921 246 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.89□□□□□ -2.11
RFC3P40938 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.89□□□□□ -2.11
RFC3P40938 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.89□□□□□ -2.11
RFC3P40938 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.89□□□□□ -2.11
RFC3P40938 USP9YP24-201ENST00000434374 697 ntBASIC1.89□□□□□ -2.11
RFC3P40938 USP9YP17-201ENST00000444617 696 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.89□□□□□ -2.11
RFC3P40938 AL441985.1-201ENST00000457727 251 ntBASIC1.89□□□□□ -2.11
RFC3P40938 RPL21P99-201ENST00000480369 423 ntBASIC1.89□□□□□ -2.11
RFC3P40938 RPL39P36-201ENST00000490784 156 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC018437.1-201ENST00000492214 406 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC116337.1-201ENST00000509680 687 ntBASIC1.89□□□□□ -2.11
RFC3P40938 ANP32BP3-201ENST00000559213 706 ntBASIC1.89□□□□□ -2.11
RFC3P40938 MIR4509-3-201ENST00000578671 94 ntBASIC1.89□□□□□ -2.11
RFC3P40938 MIR4509-2-201ENST00000583920 94 ntBASIC1.89□□□□□ -2.11
RFC3P40938 BNIP3P23-201ENST00000599655 511 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC068276.1-201ENST00000605793 379 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC107214.2-201ENST00000608204 634 ntBASIC1.89□□□□□ -2.11
RFC3P40938 AC009318.2-201ENST00000610917 651 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms