Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.47□□□□□ -1.85
CIITAP33076 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.47□□□□□ -1.85
CIITAP33076 ZNF863P-201ENST00000426746 417 ntBASIC3.47□□□□□ -1.85
CIITAP33076 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.47□□□□□ -1.85
CIITAP33076 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.47□□□□□ -1.85
CIITAP33076 RPL23AP22-201ENST00000437556 453 ntBASIC3.47□□□□□ -1.85
CIITAP33076 CYCSP32-201ENST00000440548 321 ntBASIC3.47□□□□□ -1.85
CIITAP33076 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.47□□□□□ -1.85
CIITAP33076 AL590664.1-201ENST00000448065 339 ntBASIC3.47□□□□□ -1.85
CIITAP33076 MTND3P16-201ENST00000452205 344 ntBASIC3.47□□□□□ -1.85
CIITAP33076 RNU6-333P-201ENST00000459117 107 ntBASIC3.47□□□□□ -1.85
CIITAP33076 RNU7-180P-201ENST00000459240 63 ntBASIC3.47□□□□□ -1.85
CIITAP33076 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
CIITAP33076 RPL30P14-201ENST00000482744 348 ntBASIC3.47□□□□□ -1.85
CIITAP33076 RN7SL432P-201ENST00000484057 298 ntBASIC3.47□□□□□ -1.85
CIITAP33076 MTND4LP22-201ENST00000508209 276 ntBASIC3.47□□□□□ -1.85
CIITAP33076 AC098591.2-201ENST00000510152 315 ntBASIC3.47□□□□□ -1.85
CIITAP33076 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.47□□□□□ -1.85
CIITAP33076 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.47□□□□□ -1.85
CIITAP33076 AC023050.3-201ENST00000541142 333 ntBASIC3.47□□□□□ -1.85
CIITAP33076 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.47□□□□□ -1.85
CIITAP33076 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CIITAP33076 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
CIITAP33076 OR4G1P-203ENST00000641984 1631 ntBASIC3.47□□□□□ -1.85
CIITAP33076 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
CIITAP33076 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
CIITAP33076 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CIITAP33076 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CIITAP33076 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.46□□□□□ -1.86
CIITAP33076 RNU6-797P-201ENST00000363101 109 ntBASIC3.46□□□□□ -1.86
CIITAP33076 RNU6-179P-201ENST00000363350 107 ntBASIC3.46□□□□□ -1.86
CIITAP33076 Y_RNA.157-201ENST00000363638 102 ntBASIC3.46□□□□□ -1.86
CIITAP33076 SNORA48.5-201ENST00000391143 135 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AL139397.2-201ENST00000404529 772 ntBASIC3.46□□□□□ -1.86
CIITAP33076 NDUFS5P1-201ENST00000405668 289 ntBASIC3.46□□□□□ -1.86
CIITAP33076 RNU6-193P-201ENST00000410977 107 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.46□□□□□ -1.86
CIITAP33076 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.46□□□□□ -1.86
CIITAP33076 RPL32P35-201ENST00000415214 394 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.46□□□□□ -1.86
CIITAP33076 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.46□□□□□ -1.86
CIITAP33076 AC091390.3-201ENST00000426478 338 ntBASIC3.46□□□□□ -1.86
CIITAP33076 RPL7L1P10-201ENST00000427790 463 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.46□□□□□ -1.86
CIITAP33076 AC020550.1-201ENST00000447385 163 ntBASIC3.46□□□□□ -1.86
CIITAP33076 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.46□□□□□ -1.86
CIITAP33076 AC092001.1-201ENST00000453012 261 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.46□□□□□ -1.86
CIITAP33076 HMGN2P13-201ENST00000476476 274 ntBASIC3.46□□□□□ -1.86
CIITAP33076 MTCO3P9-201ENST00000506989 781 ntBASIC3.46□□□□□ -1.86
CIITAP33076 RBBP4P6-201ENST00000508098 202 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC010486.1-201ENST00000511793 424 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.46□□□□□ -1.86
CIITAP33076 RNA5SP341-201ENST00000516261 117 ntBASIC3.46□□□□□ -1.86
CIITAP33076 SNORD59.2-201ENST00000516873 68 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.46□□□□□ -1.86
CIITAP33076 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.46□□□□□ -1.86
CIITAP33076 AP002404.1-201ENST00000532005 451 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC093012.1-202ENST00000549403 582 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.46□□□□□ -1.86
CIITAP33076 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.46□□□□□ -1.86
CIITAP33076 FGF7P1-201ENST00000582820 288 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC008521.1-201ENST00000587471 187 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC021646.1-201ENST00000605469 484 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC007619.2-201ENST00000605743 379 ntBASIC3.46□□□□□ -1.86
CIITAP33076 RNU6-89P-201ENST00000606519 100 ntBASIC3.46□□□□□ -1.86
CIITAP33076 Y_RNA.804-201ENST00000615262 101 ntBASIC3.46□□□□□ -1.86
CIITAP33076 AC090617.10-201ENST00000624308 134 ntBASIC3.46□□□□□ -1.86
CIITAP33076 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.46□□□□□ -1.86
CIITAP33076 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
CIITAP33076 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CIITAP33076 SRP72P2-201ENST00000344851 1979 ntBASIC3.45□□□□□ -1.86
CIITAP33076 TPTE2P4-201ENST00000258589 1605 ntBASIC3.45□□□□□ -1.86
CIITAP33076 NACAP2-201ENST00000318548 624 ntBASIC3.45□□□□□ -1.86
CIITAP33076 MIR22-201ENST00000362190 85 ntBASIC3.45□□□□□ -1.86
CIITAP33076 SNORA48.2-201ENST00000390926 124 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.45□□□□□ -1.86
CIITAP33076 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.45□□□□□ -1.86
CIITAP33076 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.45□□□□□ -1.86
CIITAP33076 AC012498.1-201ENST00000424037 437 ntBASIC3.45□□□□□ -1.86
CIITAP33076 NDUFB4P6-201ENST00000436819 366 ntBASIC3.45□□□□□ -1.86
CIITAP33076 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.45□□□□□ -1.86
CIITAP33076 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.45□□□□□ -1.86
CIITAP33076 AMD1P1-201ENST00000457220 922 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.45□□□□□ -1.86
CIITAP33076 HMGN2P26-201ENST00000463169 339 ntBASIC3.45□□□□□ -1.86
CIITAP33076 HSPE1P6-201ENST00000479457 291 ntBASIC3.45□□□□□ -1.86
CIITAP33076 RN7SL20P-201ENST00000488827 297 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC117522.3-201ENST00000507974 584 ntBASIC3.45□□□□□ -1.86
CIITAP33076 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CIITAP33076 AC108078.2-201ENST00000510750 236 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC112206.3-201ENST00000514578 389 ntBASIC3.45□□□□□ -1.86
CIITAP33076 SNORA31.1-201ENST00000515993 133 ntBASIC3.45□□□□□ -1.86
CIITAP33076 SNORA31.3-201ENST00000516029 96 ntBASIC3.45□□□□□ -1.86
CIITAP33076 SNORA31.5-201ENST00000516190 133 ntBASIC3.45□□□□□ -1.86
CIITAP33076 RNU6-711P-201ENST00000517255 106 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.45□□□□□ -1.86
CIITAP33076 AL118558.2-201ENST00000556294 238 ntBASIC3.45□□□□□ -1.86
CIITAP33076 MIR5583-1-201ENST00000580941 59 ntBASIC3.45□□□□□ -1.86
CIITAP33076 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms